PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0016s0257.1.p
Organism
Kalanchoe fedtschenkoi
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family SRS
Protein Properties Length: 222aa    MW: 24539.3 Da    PI: 8.9396
Description SRS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0016s0257.1.pgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF702170.96.4e-53121523153
               DUF702   3 sgtasCqdCGnqakkdCaheRCRtCCksrgfdCathvkstWvpaakrrerqqqlaaasskaaasaaeaaskrkrelkskkqsalsstkls 92 
                          s +++C+dCGnqak+dC+++RCRtCCksrgf C+thvkstWvpa++rr+ ++q++  +        +a+s  ++    +++ +l + + +
  Kaladp0016s0257.1.p  12 SSRMACHDCGNQAKRDCVYMRCRTCCKSRGFRCQTHVKSTWVPAYRRRHSHTQHHHHQLL------DASSTGQQ----QHAVQLLNPRGP 91 
                          56899*******************************************975544443222......22222222....345566677777 PP

               DUF702  93 saeskkeletsslPeevsseavfrcvrvssvdd.geeelaYqtavsigGhvfkGiLydqGle 153
                          + +s  e e   +P+e+ s+a+frcv v+s +d   e++aYq+avsigGh+fkGiLydqG+e
  Kaladp0016s0257.1.p  92 NPTSGLE-EGLMFPPEITSSAMFRCVVVRSSEDnVIEQYAYQAAVSIGGHLFKGILYDQGPE 152
                          7766644.4556*****************999945688**********************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 222 aa     Download sequence    
MRQGVGARSS SSSRMACHDC GNQAKRDCVY MRCRTCCKSR GFRCQTHVKS TWVPAYRRRH  60
SHTQHHHHQL LDASSTGQQQ HAVQLLNPRG PNPTSGLEEG LMFPPEITSS AMFRCVVVRS  120
SEDNVIEQYA YQAAVSIGGH LFKGILYDQG PELSRTPQHQ NPTTAPPPSH HHHHQYLGNE  180
GPSSSTAPPP LEAPATAFAT QQRPGYNPSP FQTGTHVFFH Q*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G75520.11e-43SRS family protein