PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0016s0324.1.p
Organism
Kalanchoe fedtschenkoi
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family M-type_MADS
Protein Properties Length: 203aa    MW: 22910.3 Da    PI: 9.8198
Description M-type_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0016s0324.1.pgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF65.55.6e-211965349
                         --SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEE CS
               SRF-TF  3 ienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyey 49
                          e +sn  vtfskRr g++KKA+EL++LC++++a+i+fs+  k++ +
  Kaladp0016s0324.1.p 19 MEKESNLLVTFSKRRSGLFKKASELCTLCGVQIAIIVFSPGKKVFSF 65
                         57889999********************************9999887 PP
Sequence ? help Back to Top
Protein Sequence    Length: 203 aa     Download sequence    
MDQIERKNKG RRKIKMAKME KESNLLVTFS KRRSGLFKKA SELCTLCGVQ IAIIVFSPGK  60
KVFSFGHPNV ETIVDRYLTS PNFSSPQPNN NSNINMLEAH RSAKIQELNA EVTQVTTQLE  120
SEKKRGEALD KMRKMNQNKC WWENNVSELN LAQLQHLLVA LEELKIDVAK EAVMGASTSN  180
QIVPYMGTYN DTYPGSNIFN NL*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G60440.11e-53M-type_MADS family protein