PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Kaladp0016s0360.1.p

Organism

Kalanchoe fedtschenkoi

Taxonomic ID

63787

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe

Family

WRKY

Protein Properties

Length: 619aa MW: 67777.6 Da PI: 5.5154

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Kaladp0016s0360.1.p	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	97.1	1.1e-30	360	418	2	59
--SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 +D ++WrKYGqK++kgs++pr+YYrC+s+ gC+++k+vers++dp++++itY++eHnh+ Kaladp0016s0360.1.p 360 SDLWAWRKYGQKPIKGSPYPRGYYRCSSSkGCWARKQVERSRTDPNMLVITYTSEHNHP 418 699**********************998**************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 619 aa Download sequence
MCSSSSFYGL PREGSVLDDR ERHHQGDLAD MIRSISGAAT RLYSDSFSSS WTQPYHLATD 60 NDNIVTDHQV PLTATAAAQD QNDPLFTFYH DQQQQPGACL VRPSSHLDVG YFGADPFSST 120 MIRDPLPRED GMMMMMNCSS NDHLYYSMSA SNYTLATHNN LLPATASSTM TLMIMKSEGI 180 LEDASSESGS HLLCSSSATK DISSTIGDLG LQAEPTQQCQ EPAAATSSII SMPNCNVIPR 240 MHHISPDIVS QQASAPAPPS IDNNELPISP QNKETLLLKP APVSSSDFAV FGGSGDIDSS 300 SNRMLDQTRT AENICGHLTE TISSPRNPAV KRRKNLTKKV VCVPAPAPAN SRSSGEVVPS 360 DLWAWRKYGQ KPIKGSPYPR GYYRCSSSKG CWARKQVERS RTDPNMLVIT YTSEHNHPWP 420 TQRNALAGST RSQPSKNKSS TPGSNTTSQL TTGAIQQQQH LIEHGHALHS KCNVEESEKQ 480 RGDEPADANK IMITSQSKDE KEVPAISDTF IKEELGDADH VGDEDDTNNQ LDRNDGCDAN 540 QLGATYNHYD SNKHWCSQKI FRPTIGLHED GNYQQTPVEQ SQDDFFAELG GISGNDAFSY 600 LDWPSLERKT TTRTLHDG*

Sequence ? help Back to Top

Protein Sequence Length: 619 aa Download sequence

MCSSSSFYGL PREGSVLDDR ERHHQGDLAD MIRSISGAAT RLYSDSFSSS WTQPYHLATD  60
NDNIVTDHQV PLTATAAAQD QNDPLFTFYH DQQQQPGACL VRPSSHLDVG YFGADPFSST  120
MIRDPLPRED GMMMMMNCSS NDHLYYSMSA SNYTLATHNN LLPATASSTM TLMIMKSEGI  180
LEDASSESGS HLLCSSSATK DISSTIGDLG LQAEPTQQCQ EPAAATSSII SMPNCNVIPR  240
MHHISPDIVS QQASAPAPPS IDNNELPISP QNKETLLLKP APVSSSDFAV FGGSGDIDSS  300
SNRMLDQTRT AENICGHLTE TISSPRNPAV KRRKNLTKKV VCVPAPAPAN SRSSGEVVPS  360
DLWAWRKYGQ KPIKGSPYPR GYYRCSSSKG CWARKQVERS RTDPNMLVIT YTSEHNHPWP  420
TQRNALAGST RSQPSKNKSS TPGSNTTSQL TTGAIQQQQH LIEHGHALHS KCNVEESEKQ  480
RGDEPADANK IMITSQSKDE KEVPAISDTF IKEELGDADH VGDEDDTNNQ LDRNDGCDAN  540
QLGATYNHYD SNKHWCSQKI FRPTIGLHED GNYQQTPVEQ SQDDFFAELG GISGNDAFSY  600
LDWPSLERKT TTRTLHDG*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G34830.1	2e-63	WRKY family protein