PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0017s0022.1.p
Organism
Kalanchoe fedtschenkoi
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family MIKC_MADS
Protein Properties Length: 258aa    MW: 30334.4 Da    PI: 7.8216
Description MIKC_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0017s0022.1.pgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF92.91.5e-29959151
                         S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS
               SRF-TF  1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51
                         krienk+nr+vtfskRr+g+ KKA+E+SvLCdaeva+iifs +gkl+eys+
  Kaladp0017s0022.1.p  9 KRIENKINRKVTFSKRRTGLVKKAHEISVLCDAEVALIIFSGDGKLFEYST 59
                         79***********************************************96 PP
2K-box92.95.3e-31821802100
                K-box   2 qkssgksleeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeen 91 
                          q+   ++l+++ +e  + e++kLk+++e Lqr++Rh+lGed+++Ls+ eLq+Le+qL+ slk+iR++Kn+l++e+i+elqkke+ +qe+n
  Kaladp0017s0022.1.p  82 QQMGASDLQQNPQEIKSMEYNKLKSRLELLQRNHRHYLGEDVDTLSMGELQNLEHQLHASLKRIRERKNHLMHESISELQKKERVMQEQN 171
                          55555668888888999************************************************************************* PP

                K-box  92 kaLrkklee 100
                          ++L++k +e
  Kaladp0017s0022.1.p 172 NMLTRKEKE 180
                          *****9876 PP
Sequence ? help Back to Top
Protein Sequence    Length: 258 aa     Download sequence    
MGRRRVELKR IENKINRKVT FSKRRTGLVK KAHEISVLCD AEVALIIFSG DGKLFEYSTD  60
SCMEKILERY ERYSYAERQH YQQMGASDLQ QNPQEIKSME YNKLKSRLEL LQRNHRHYLG  120
EDVDTLSMGE LQNLEHQLHA SLKRIRERKN HLMHESISEL QKKERVMQEQ NNMLTRKEKE  180
MEKTLMVRQE EVHQWEHQHQ HNHGTASSSS FHLGQPVPCL NTGHTTYQVE ADGMMSQNEL  240
ELTLEPVYSY HLGLFAA*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G69120.14e-95MIKC_MADS family protein