PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0018s0040.3.p
Organism
Kalanchoe fedtschenkoi
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family MIKC_MADS
Protein Properties Length: 192aa    MW: 22087.7 Da    PI: 10.2555
Description MIKC_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0018s0040.3.pgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF93.69.1e-30959151
                         S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS
               SRF-TF  1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51
                         krienk+nrqvtfskRr+g+lKKA+E+SvLCdaeva+iifs++gkl++y++
  Kaladp0018s0040.3.p  9 KRIENKINRQVTFSKRRTGLLKKANEISVLCDAEVALIIFSTKGKLFDYAT 59
                         79***********************************************86 PP
2K-box99.35.6e-3379172598
                K-box   5 sgksleeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaL 94 
                          + ++++ + + s+  e+a+Lk++i++Lq++q h++GedL+sL+lkeLq+Le+qL+++lk+iR+kK++l++e+i+el+kk k+lq +n++L
  Kaladp0018s0040.3.p  79 QLVAADIESNGSWLLEHARLKARIDTLQKKQSHYMGEDLDSLTLKELQNLENQLDNALKHIRTKKSQLMFESISELKKKDKALQGQNTKL 168
                          55556667778999**************************************************************************** PP

                K-box  95 rkkl 98 
                           k++
  Kaladp0018s0040.3.p 169 AKQV 172
                          9987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 192 aa     Download sequence    
MGRGRVQMKR IENKINRQVT FSKRRTGLLK KANEISVLCD AEVALIIFST KGKLFDYATD  60
SCMERILERY ERYSSAKTQL VAADIESNGS WLLEHARLKA RIDTLQKKQS HYMGEDLDSL  120
TLKELQNLEN QLDNALKHIR TKKSQLMFES ISELKKKDKA LQGQNTKLAK QVTFCLTNQL  180
QCLLRLFISL F*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G69120.17e-90MIKC_MADS family protein