PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0018s0054.2.p
Organism
Kalanchoe fedtschenkoi
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family MIKC_MADS
Protein Properties Length: 246aa    MW: 27495.6 Da    PI: 10.3113
Description MIKC_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0018s0054.2.pgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF931.4e-29959151
                         S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS
               SRF-TF  1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51
                         krienk+nrqvtfskRr+g+lKKA+E+SvLCdaeva+iifs++gkl++y++
  Kaladp0018s0054.2.p  9 KRIENKINRQVTFSKRRTGLLKKANEISVLCDAEVALIIFSTKGKLFDYAT 59
                         79***********************************************86 PP
2K-box101.21.4e-338617412100
                K-box  12 akaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkklee 100
                          + + s++ e+a+Lk++i++Lq++q h++GedL+sL+lkeLq+Le+qLe++lk+iR+kK++l++e+i++l+kk k+lq +n++L k+++e
  Kaladp0018s0054.2.p  86 ESNGSWHLEHARLKARIDTLQKKQSHYMGEDLNSLTLKELQNLENQLENALKHIRAKKSQLMFESISDLKKKDKALQGQNTKLAKQIKE 174
                          55689*********************************************************************************986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 246 aa     Download sequence    
MGRGRVQMKR IENKINRQVT FSKRRTGLLK KANEISVLCD AEVALIIFST KGKLFDYATD  60
SCMGRILERY ERYSCAETRL VATDIESNGS WHLEHARLKA RIDTLQKKQS HYMGEDLNSL  120
TLKELQNLEN QLENALKHIR AKKSQLMFES ISDLKKKDKA LQGQNTKLAK QIKEKEKSKG  180
TLMDQQSHAA SPASLRAPQI CLGPLTVSRG NLYHGAGDGG AASSALHQNS ATTFLPRWML  240
SHLGE*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G60910.17e-86MIKC_MADS family protein