PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Kaladp0018s0192.1.p

Organism

Kalanchoe fedtschenkoi

Taxonomic ID

63787

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe

Family

FAR1

Protein Properties

Length: 780aa MW: 89288.6 Da PI: 6.4465

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Kaladp0018s0192.1.p	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	99.7	3.1e-31	72	163	2	91
FAR1 2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk..tekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHel 89 fYn+YA++vGFs+r+s+s++s+r+g i++r+fvC keg+r+ ++k+ +++ +r+r+ tr+gCka+l vk +++gkw v+ +++eHnH+l Kaladp0018s0192.1.p 72 FYNSYARRVGFSTRVSSSRRSRRDGAIIQRQFVCAKEGFRNLNEKRtkDREIKRPRTITRVGCKASLSVKIQDSGKWAVSGFVKEHNHDL 161 9*************************************998888545677889********************************9 PP FAR1 90 ap 91 +p Kaladp0018s0192.1.p 162 VP 163 86 PP

Sequence ? help Back to Top
Protein Sequence Length: 780 aa Download sequence
MDHEIIEFDV ELGGGGEEDG VDIENAVDYD DMGQTYSGAG GVGEVYIPEG EFLDLEPYEG 60 MEFESEEAAK AFYNSYARRV GFSTRVSSSR RSRRDGAIIQ RQFVCAKEGF RNLNEKRTKD 120 REIKRPRTIT RVGCKASLSV KIQDSGKWAV SGFVKEHNHD LVPPDQVHCL RSHRQISGPA 180 KALIDTLQAA GMGPRRIMSA LIKEYGGISK VGFTEVDCRN YMRTNRSRNM EGDLQLLLDY 240 LRQMHNENPA FFYAVQSEED QNMSNVFWAD PKARSNYSYF SDTVTLDTTY RYNRYRLPFV 300 TFTGVNSHGQ PVLFGCAFLI NESEASFVWL FNTWLTAMSG QHPSSITTDH DAIVRSAITQ 360 VFPNTRHRFC KWHIFKKCQE MLSQVFLEHP GFEADLHKCV NLTDSIDEFE SCWLSLVDKY 420 DLRDHDWLQS LYSARKQWIP VYLRDAFFAE MSISQRSDSM NSYFDGYVNA STTLNQFFKL 480 YEKAIESRHE KEIKADFETV STPPSLKTPS PMEKQVSGLY TRKTFARFQE ELVGTLTFTA 540 SKVEDDGEVI TYQVVKFGEE HKAHYVRFKV LEMRASCSCQ MFEFSGLLCR HVLAVFRVTN 600 VLTLPSHYIL KRWTRNAKSN ITLEVRSNTA YTNYLESHTV RYSTLRHEAF RFVDEGAKTM 660 DTYNVAVDAL QEAFKKVTDA AKNEGNYAVP NGRPKEAPAS VGNQASLTTQ NQLCHVTENM 720 SEDEMDKKIQ ELISELDYAN KKCEVYRSNL LSVIKDIADH KHELLVKVQN IKMDMKECA*

Sequence ? help Back to Top

Protein Sequence Length: 780 aa Download sequence

MDHEIIEFDV ELGGGGEEDG VDIENAVDYD DMGQTYSGAG GVGEVYIPEG EFLDLEPYEG  60
MEFESEEAAK AFYNSYARRV GFSTRVSSSR RSRRDGAIIQ RQFVCAKEGF RNLNEKRTKD  120
REIKRPRTIT RVGCKASLSV KIQDSGKWAV SGFVKEHNHD LVPPDQVHCL RSHRQISGPA  180
KALIDTLQAA GMGPRRIMSA LIKEYGGISK VGFTEVDCRN YMRTNRSRNM EGDLQLLLDY  240
LRQMHNENPA FFYAVQSEED QNMSNVFWAD PKARSNYSYF SDTVTLDTTY RYNRYRLPFV  300
TFTGVNSHGQ PVLFGCAFLI NESEASFVWL FNTWLTAMSG QHPSSITTDH DAIVRSAITQ  360
VFPNTRHRFC KWHIFKKCQE MLSQVFLEHP GFEADLHKCV NLTDSIDEFE SCWLSLVDKY  420
DLRDHDWLQS LYSARKQWIP VYLRDAFFAE MSISQRSDSM NSYFDGYVNA STTLNQFFKL  480
YEKAIESRHE KEIKADFETV STPPSLKTPS PMEKQVSGLY TRKTFARFQE ELVGTLTFTA  540
SKVEDDGEVI TYQVVKFGEE HKAHYVRFKV LEMRASCSCQ MFEFSGLLCR HVLAVFRVTN  600
VLTLPSHYIL KRWTRNAKSN ITLEVRSNTA YTNYLESHTV RYSTLRHEAF RFVDEGAKTM  660
DTYNVAVDAL QEAFKKVTDA AKNEGNYAVP NGRPKEAPAS VGNQASLTTQ NQLCHVTENM  720
SEDEMDKKIQ ELISELDYAN KKCEVYRSNL LSVIKDIADH KHELLVKVQN IKMDMKECA*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	0.0	FAR1 family protein