PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Kaladp0018s0253.1.p

Organism

Kalanchoe fedtschenkoi

Taxonomic ID

63787

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe

Family

WRKY

Protein Properties

Length: 405aa MW: 43639.2 Da PI: 6.2261

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Kaladp0018s0253.1.p	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	107.3	7.9e-34	191	248	1	58
---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnh 58 ldDgy+WrKYGqK vk+s+fprsYYrCts++C vkk+vers+ed ++v++tYeg+H+h Kaladp0018s0253.1.p 191 LDDGYRWRKYGQKAVKNSPFPRSYYRCTSPSCAVKKRVERSSEDSTIVVTTYEGQHTH 248 59******************************************************** PP

Sequence ? help Back to Top
Protein Sequence Length: 405 aa Download sequence
MERAEDQSGK IDSLLMMNPS SFADQIPATS FTLSGLFDTP PFAASPAPLP ASNSYDIDKS 60 GGGSVLGFSD LLGFQDYCYG ASLFDLIQTS PPLAPVAMAP SPASTIHETS EVVNGPMTPN 120 SSSISMSSNE AAAAANEEQS KDCQDIIGEN NGQEDQDRDK TKKQLKPKKK NQKKEKEPRF 180 AFMTKSEVDH LDDGYRWRKY GQKAVKNSPF PRSYYRCTSP SCAVKKRVER SSEDSTIVVT 240 TYEGQHTHLS PVMARGSITN SLLHHHLETT NPNNNNNASN SCFVLGGSSP APPSFAVPQQ 300 PLFHHNHHHS QSPSSLFNNN ATPVVPSALS SFIDNNPSTA PSSHTPSPSL GPNPFFQQRH 360 FCPSPAADDQ HAAAPATAGG SSSCLMRDDG LLQDMIQRSD LKEE*

Sequence ? help Back to Top

Protein Sequence Length: 405 aa Download sequence

MERAEDQSGK IDSLLMMNPS SFADQIPATS FTLSGLFDTP PFAASPAPLP ASNSYDIDKS  60
GGGSVLGFSD LLGFQDYCYG ASLFDLIQTS PPLAPVAMAP SPASTIHETS EVVNGPMTPN  120
SSSISMSSNE AAAAANEEQS KDCQDIIGEN NGQEDQDRDK TKKQLKPKKK NQKKEKEPRF  180
AFMTKSEVDH LDDGYRWRKY GQKAVKNSPF PRSYYRCTSP SCAVKKRVER SSEDSTIVVT  240
TYEGQHTHLS PVMARGSITN SLLHHHLETT NPNNNNNASN SCFVLGGSSP APPSFAVPQQ  300
PLFHHNHHHS QSPSSLFNNN ATPVVPSALS SFIDNNPSTA PSSHTPSPSL GPNPFFQQRH  360
FCPSPAADDQ HAAAPATAGG SSSCLMRDDG LLQDMIQRSD LKEE*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G47260.1	5e-40	WRKY family protein