PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Kaladp0018s0264.1.p

Organism

Kalanchoe fedtschenkoi

Taxonomic ID

63787

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe

Family

CAMTA

Protein Properties

Length: 946aa MW: 106941 Da PI: 6.4064

Description

CAMTA family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Kaladp0018s0264.1.p	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	CG-1	158	1.9e-49	50	164	4	117
CG-1 4 e.kkrwlkneeiaaiLenfekheltlelktrpksgsliLynrkkvryfrkDGyswkkkkdgktvrEdhekLKvggvevlycyYahseenp 92 e k+rwl+++ei+aiL n+ + ++ ++ + pksg++ L++rkk+r+frkDG++wkkk dgktv+E+he+LKvg+ e +++yYah+++n+ Kaladp0018s0264.1.p 50 EaKSRWLRPNEIHAILFNHMYFPIHVKPVNLPKSGEIHLFDRKKLRNFRKDGHNWKKKNDGKTVKEAHEHLKVGNEERIHVYYAHGQDNA 139 559************************************************************************************* PP CG-1 93 tfqrrcywlLeeelekivlvhylev 117 tf rrcywlL++++e+ivlvhy+e+ Kaladp0018s0264.1.p 140 TFVRRCYWLLDKSMEHIVLVHYRET 164 ********************986 PP

Sequence ? help Back to Top
Protein Sequence Length: 946 aa Download sequence
MCAFGVDQLF DFVGSEEIGG LVMESVLLDG FQIHGFRTMN ELDLKSIFEE AKSRWLRPNE 60 IHAILFNHMY FPIHVKPVNL PKSGEIHLFD RKKLRNFRKD GHNWKKKNDG KTVKEAHEHL 120 KVGNEERIHV YYAHGQDNAT FVRRCYWLLD KSMEHIVLVH YRETCELLDP SAAPVNSNSS 180 SGLTELHVPF LTYEETESGS QQSNTSNQLE YIESIENVTA VTLERRLREI NTLDWDELLV 240 DTDPSVPIAY EEGKSGGVQQ QNPVMINVSK DDGSALLMNL PTELSSGWHS ACPETRSDSI 300 NGDILDGSYN HAVHSQLMME AAPNNSGTLF GGQSFSITQG GGQDQDRRWM NSSLTVESPG 360 SVNDSIHESS ISSAQNSMVP TIMDQPQSAD QIFTITDISP EWAFSCEKTK ILLTGYFHQG 420 FGNLLNSNLY CVCGSSCVPV EIVQTGVMRC ILPPHSPGQF DLYLSTERLK PVSQLKTFEY 480 RSSLQADQNI PSDNLSEWDE FRNKMRLVRL LFSSSKTLNI LSAKVSEHTV NEAKKFSEKT 540 SHTASSWALL KQSVDENKIS LHQAEEILFE QAIRNRLQDW LLERIIEEQS PSDYDEQGLG 600 VLHLCAILNY TWAVYLYSKS GLSLDFRDKY GWTALHWAAY YGREDIVGAL LSAGARPNLV 660 TDPTPLIPGG CTASDLAAQK GHNGLAAYLG EEALVDHFND MALAGNASGS IEFQRTCSVK 720 RETVYDEASC LKDTLAAYRT AADAAARINA AFREQSLKLR TEAVQGSNPE DEARTIISAM 780 KIQHAFRSFE SRKKMAAALR IQYGFRTWKT RRDFLNMRQQ AIKIQAVFRG FQVRRHYRKI 840 IWSVGVLEKA VLRWRFKRRG FRGLQVAPVQ EITSVAQEQE NDVEEDFFVL GRKQAEDRVE 900 SAVIKVQAMF RSKQAQQEYR RMKLAHNQAK IEYEGFFNHN AKMES*

Sequence ? help Back to Top

Protein Sequence Length: 946 aa Download sequence

MCAFGVDQLF DFVGSEEIGG LVMESVLLDG FQIHGFRTMN ELDLKSIFEE AKSRWLRPNE  60
IHAILFNHMY FPIHVKPVNL PKSGEIHLFD RKKLRNFRKD GHNWKKKNDG KTVKEAHEHL  120
KVGNEERIHV YYAHGQDNAT FVRRCYWLLD KSMEHIVLVH YRETCELLDP SAAPVNSNSS  180
SGLTELHVPF LTYEETESGS QQSNTSNQLE YIESIENVTA VTLERRLREI NTLDWDELLV  240
DTDPSVPIAY EEGKSGGVQQ QNPVMINVSK DDGSALLMNL PTELSSGWHS ACPETRSDSI  300
NGDILDGSYN HAVHSQLMME AAPNNSGTLF GGQSFSITQG GGQDQDRRWM NSSLTVESPG  360
SVNDSIHESS ISSAQNSMVP TIMDQPQSAD QIFTITDISP EWAFSCEKTK ILLTGYFHQG  420
FGNLLNSNLY CVCGSSCVPV EIVQTGVMRC ILPPHSPGQF DLYLSTERLK PVSQLKTFEY  480
RSSLQADQNI PSDNLSEWDE FRNKMRLVRL LFSSSKTLNI LSAKVSEHTV NEAKKFSEKT  540
SHTASSWALL KQSVDENKIS LHQAEEILFE QAIRNRLQDW LLERIIEEQS PSDYDEQGLG  600
VLHLCAILNY TWAVYLYSKS GLSLDFRDKY GWTALHWAAY YGREDIVGAL LSAGARPNLV  660
TDPTPLIPGG CTASDLAAQK GHNGLAAYLG EEALVDHFND MALAGNASGS IEFQRTCSVK  720
RETVYDEASC LKDTLAAYRT AADAAARINA AFREQSLKLR TEAVQGSNPE DEARTIISAM  780
KIQHAFRSFE SRKKMAAALR IQYGFRTWKT RRDFLNMRQQ AIKIQAVFRG FQVRRHYRKI  840
IWSVGVLEKA VLRWRFKRRG FRGLQVAPVQ EITSVAQEQE NDVEEDFFVL GRKQAEDRVE  900
SAVIKVQAMF RSKQAQQEYR RMKLAHNQAK IEYEGFFNHN AKMES*

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	91	107	RKKLRNFRKDGHNWKKK
2	92	108	RKKLRNFRKDGHNWKKK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G16150.1	0.0	CAMTA family protein