PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Kaladp0018s0264.2.p

Organism

Kalanchoe fedtschenkoi

Taxonomic ID

63787

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe

Family

CAMTA

Protein Properties

Length: 771aa MW: 87349.2 Da PI: 6.3541

Description

CAMTA family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Kaladp0018s0264.2.p	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	CG-1	158.4	1.4e-49	28	142	4	117
CG-1 4 e.kkrwlkneeiaaiLenfekheltlelktrpksgsliLynrkkvryfrkDGyswkkkkdgktvrEdhekLKvggvevlycyYahseenp 92 e k+rwl+++ei+aiL n+ + ++ ++ + pksg++ L++rkk+r+frkDG++wkkk dgktv+E+he+LKvg+ e +++yYah+++n+ Kaladp0018s0264.2.p 28 EaKSRWLRPNEIHAILFNHMYFPIHVKPVNLPKSGEIHLFDRKKLRNFRKDGHNWKKKNDGKTVKEAHEHLKVGNEERIHVYYAHGQDNA 117 559************************************************************************************* PP CG-1 93 tfqrrcywlLeeelekivlvhylev 117 tf rrcywlL++++e+ivlvhy+e+ Kaladp0018s0264.2.p 118 TFVRRCYWLLDKSMEHIVLVHYRET 142 ********************986 PP

Sequence ? help Back to Top
Protein Sequence Length: 771 aa Download sequence
MESVLLDGFQ IHGFRTMNEL DLKSIFEEAK SRWLRPNEIH AILFNHMYFP IHVKPVNLPK 60 SGEIHLFDRK KLRNFRKDGH NWKKKNDGKT VKEAHEHLKV GNEERIHVYY AHGQDNATFV 120 RRCYWLLDKS MEHIVLVHYR ETCELLDPSA APVNSNSSSG LTELHVPFLT YEETESGSQQ 180 SNTSNQLEYI ESIENVTAVT LERRLREINT LDWDELLVDT DPSVPIAYEE GKSGGVQQQN 240 PVMINVSKDD GSALLMNLPT ELSSGWHSAC PETRSDSING DILDGSYNHA VHSQLMMEAA 300 PNNSGTLFGG QSFSITQGGG QDQDRRWMNS SLTVESPGSV NDSIHESSIS SAQNSMVPTI 360 MDQPQSADQI FTITDISPEW AFSCEKTKAE EILFEQAIRN RLQDWLLERI IEEQSPSDYD 420 EQGLGVLHLC AILNYTWAVY LYSKSGLSLD FRDKYGWTAL HWAAYYGRED IVGALLSAGA 480 RPNLVTDPTP LIPGGCTASD LAAQKGHNGL AAYLGEEALV DHFNDMALAG NASGSIEFQR 540 TCSVKRETVY DEASCLKDTL AAYRTAADAA ARINAAFREQ SLKLRTEAVQ GSNPEDEART 600 IISAMKIQHA FRSFESRKKM AAALRIQYGF RTWKTRRDFL NMRQQAIKIQ AVFRGFQVRR 660 HYRKIIWSVG VLEKAVLRWR FKRRGFRGLQ VAPVQEITSV AQEQENDVEE DFFVLGRKQA 720 EDRVESAVIK VQAMFRSKQA QQEYRRMKLA HNQAKIEYEG FFNHNAKMES *

Sequence ? help Back to Top

Protein Sequence Length: 771 aa Download sequence

MESVLLDGFQ IHGFRTMNEL DLKSIFEEAK SRWLRPNEIH AILFNHMYFP IHVKPVNLPK  60
SGEIHLFDRK KLRNFRKDGH NWKKKNDGKT VKEAHEHLKV GNEERIHVYY AHGQDNATFV  120
RRCYWLLDKS MEHIVLVHYR ETCELLDPSA APVNSNSSSG LTELHVPFLT YEETESGSQQ  180
SNTSNQLEYI ESIENVTAVT LERRLREINT LDWDELLVDT DPSVPIAYEE GKSGGVQQQN  240
PVMINVSKDD GSALLMNLPT ELSSGWHSAC PETRSDSING DILDGSYNHA VHSQLMMEAA  300
PNNSGTLFGG QSFSITQGGG QDQDRRWMNS SLTVESPGSV NDSIHESSIS SAQNSMVPTI  360
MDQPQSADQI FTITDISPEW AFSCEKTKAE EILFEQAIRN RLQDWLLERI IEEQSPSDYD  420
EQGLGVLHLC AILNYTWAVY LYSKSGLSLD FRDKYGWTAL HWAAYYGRED IVGALLSAGA  480
RPNLVTDPTP LIPGGCTASD LAAQKGHNGL AAYLGEEALV DHFNDMALAG NASGSIEFQR  540
TCSVKRETVY DEASCLKDTL AAYRTAADAA ARINAAFREQ SLKLRTEAVQ GSNPEDEART  600
IISAMKIQHA FRSFESRKKM AAALRIQYGF RTWKTRRDFL NMRQQAIKIQ AVFRGFQVRR  660
HYRKIIWSVG VLEKAVLRWR FKRRGFRGLQ VAPVQEITSV AQEQENDVEE DFFVLGRKQA  720
EDRVESAVIK VQAMFRSKQA QQEYRRMKLA HNQAKIEYEG FFNHNAKMES *

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	69	85	RKKLRNFRKDGHNWKKK
2	70	86	RKKLRNFRKDGHNWKKK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G16150.1	1e-146	CAMTA family protein