PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Kaladp0018s0264.3.p

Organism

Kalanchoe fedtschenkoi

Taxonomic ID

63787

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe

Family

CAMTA

Protein Properties

Length: 924aa MW: 104625 Da PI: 6.6235

Description

CAMTA family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Kaladp0018s0264.3.p	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	CG-1	158	1.9e-49	28	142	4	117
CG-1 4 e.kkrwlkneeiaaiLenfekheltlelktrpksgsliLynrkkvryfrkDGyswkkkkdgktvrEdhekLKvggvevlycyYahseenp 92 e k+rwl+++ei+aiL n+ + ++ ++ + pksg++ L++rkk+r+frkDG++wkkk dgktv+E+he+LKvg+ e +++yYah+++n+ Kaladp0018s0264.3.p 28 EaKSRWLRPNEIHAILFNHMYFPIHVKPVNLPKSGEIHLFDRKKLRNFRKDGHNWKKKNDGKTVKEAHEHLKVGNEERIHVYYAHGQDNA 117 559************************************************************************************* PP CG-1 93 tfqrrcywlLeeelekivlvhylev 117 tf rrcywlL++++e+ivlvhy+e+ Kaladp0018s0264.3.p 118 TFVRRCYWLLDKSMEHIVLVHYRET 142 ********************986 PP

Sequence ? help Back to Top
Protein Sequence Length: 924 aa Download sequence
MESVLLDGFQ IHGFRTMNEL DLKSIFEEAK SRWLRPNEIH AILFNHMYFP IHVKPVNLPK 60 SGEIHLFDRK KLRNFRKDGH NWKKKNDGKT VKEAHEHLKV GNEERIHVYY AHGQDNATFV 120 RRCYWLLDKS MEHIVLVHYR ETCELLDPSA APVNSNSSSG LTELHVPFLT YEETESGSQQ 180 SNTSNQLEYI ESIENVTAVT LERRLREINT LDWDELLVDT DPSVPIAYEE GKSGGVQQQN 240 PVMINVSKDD GSALLMNLPT ELSSGWHSAC PETRSDSING DILDGSYNHA VHSQLMMEAA 300 PNNSGTLFGG QSFSITQGGG QDQDRRWMNS SLTVESPGSV NDSIHESSIS SAQNSMVPTI 360 MDQPQSADQI FTITDISPEW AFSCEKTKIL LTGYFHQGFG NLLNSNLYCV CGSSCVPVEI 420 VQTGVMRCIL PPHSPGQFDL YLSTERLKPV SQLKTFEYRS SLQADQNIPS DNLSEWDEFR 480 NKMRLVRLLF SSSKTLNILS AKVSEHTVNE AKKFSEKTSH TASSWALLKQ SVDENKISLH 540 QAEEILFEQA IRNRLQDWLL ERIIEEQSPS DYDEQGLGVL HLCAILNYTW AVYLYSKSGL 600 SLDFRDKYGW TALHWAAYYG REDIVGALLS AGARPNLVTD PTPLIPGGCT ASDLAAQKGH 660 NGLAAYLGEE ALVDHFNDMA LAGNASGSIE FQRTCSVKRE TVYDEASCLK DTLAAYRTAA 720 DAAARINAAF REQSLKLRTE AVQGSNPEDE ARTIISAMKI QHAFRSFESR KKMAAALRIQ 780 YGFRTWKTRR DFLNMRQQAI KIQAVFRGFQ VRRHYRKIIW SVGVLEKAVL RWRFKRRGFR 840 GLQVAPVQEI TSVAQEQEND VEEDFFVLGR KQAEDRVESA VIKVQAMFRS KQAQQEYRRM 900 KLAHNQAKIE YEGFFNHNAK MES*

Sequence ? help Back to Top

Protein Sequence Length: 924 aa Download sequence

MESVLLDGFQ IHGFRTMNEL DLKSIFEEAK SRWLRPNEIH AILFNHMYFP IHVKPVNLPK  60
SGEIHLFDRK KLRNFRKDGH NWKKKNDGKT VKEAHEHLKV GNEERIHVYY AHGQDNATFV  120
RRCYWLLDKS MEHIVLVHYR ETCELLDPSA APVNSNSSSG LTELHVPFLT YEETESGSQQ  180
SNTSNQLEYI ESIENVTAVT LERRLREINT LDWDELLVDT DPSVPIAYEE GKSGGVQQQN  240
PVMINVSKDD GSALLMNLPT ELSSGWHSAC PETRSDSING DILDGSYNHA VHSQLMMEAA  300
PNNSGTLFGG QSFSITQGGG QDQDRRWMNS SLTVESPGSV NDSIHESSIS SAQNSMVPTI  360
MDQPQSADQI FTITDISPEW AFSCEKTKIL LTGYFHQGFG NLLNSNLYCV CGSSCVPVEI  420
VQTGVMRCIL PPHSPGQFDL YLSTERLKPV SQLKTFEYRS SLQADQNIPS DNLSEWDEFR  480
NKMRLVRLLF SSSKTLNILS AKVSEHTVNE AKKFSEKTSH TASSWALLKQ SVDENKISLH  540
QAEEILFEQA IRNRLQDWLL ERIIEEQSPS DYDEQGLGVL HLCAILNYTW AVYLYSKSGL  600
SLDFRDKYGW TALHWAAYYG REDIVGALLS AGARPNLVTD PTPLIPGGCT ASDLAAQKGH  660
NGLAAYLGEE ALVDHFNDMA LAGNASGSIE FQRTCSVKRE TVYDEASCLK DTLAAYRTAA  720
DAAARINAAF REQSLKLRTE AVQGSNPEDE ARTIISAMKI QHAFRSFESR KKMAAALRIQ  780
YGFRTWKTRR DFLNMRQQAI KIQAVFRGFQ VRRHYRKIIW SVGVLEKAVL RWRFKRRGFR  840
GLQVAPVQEI TSVAQEQEND VEEDFFVLGR KQAEDRVESA VIKVQAMFRS KQAQQEYRRM  900
KLAHNQAKIE YEGFFNHNAK MES*

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	69	85	RKKLRNFRKDGHNWKKK
2	70	86	RKKLRNFRKDGHNWKKK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G16150.1	0.0	CAMTA family protein