PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Kaladp0018s0264.4.p

Organism

Kalanchoe fedtschenkoi

Taxonomic ID

63787

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe

Family

CAMTA

Protein Properties

Length: 912aa MW: 103244 Da PI: 6.5981

Description

CAMTA family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Kaladp0018s0264.4.p	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	CG-1	158	1.8e-49	16	130	4	117
CG-1 4 e.kkrwlkneeiaaiLenfekheltlelktrpksgsliLynrkkvryfrkDGyswkkkkdgktvrEdhekLKvggvevlycyYahseenp 92 e k+rwl+++ei+aiL n+ + ++ ++ + pksg++ L++rkk+r+frkDG++wkkk dgktv+E+he+LKvg+ e +++yYah+++n+ Kaladp0018s0264.4.p 16 EaKSRWLRPNEIHAILFNHMYFPIHVKPVNLPKSGEIHLFDRKKLRNFRKDGHNWKKKNDGKTVKEAHEHLKVGNEERIHVYYAHGQDNA 105 559************************************************************************************* PP CG-1 93 tfqrrcywlLeeelekivlvhylev 117 tf rrcywlL++++e+ivlvhy+e+ Kaladp0018s0264.4.p 106 TFVRRCYWLLDKSMEHIVLVHYRET 130 ********************986 PP

Sequence ? help Back to Top
Protein Sequence Length: 912 aa Download sequence
MLCDYAELDL KSIFEEAKSR WLRPNEIHAI LFNHMYFPIH VKPVNLPKSG EIHLFDRKKL 60 RNFRKDGHNW KKKNDGKTVK EAHEHLKVGN EERIHVYYAH GQDNATFVRR CYWLLDKSME 120 HIVLVHYRET CELLDPSAAP VNSNSSSGLT ELHVPFLTYE ETESGSQQSN TSNQLEYIES 180 IENVTAVTLE RRLREINTLD WDELLVDTDP SVPIAYEEGK SGGVQQQNPV MINVSKDDGS 240 ALLMNLPTEL SSGWHSACPE TRSDSINGDI LDGSYNHAVH SQLMMEAAPN NSGTLFGGQS 300 FSITQGGGQD QDRRWMNSSL TVESPGSVND SIHESSISSA QNSMVPTIMD QPQSADQIFT 360 ITDISPEWAF SCEKTKILLT GYFHQGFGNL LNSNLYCVCG SSCVPVEIVQ TGVMRCILPP 420 HSPGQFDLYL STERLKPVSQ LKTFEYRSSL QADQNIPSDN LSEWDEFRNK MRLVRLLFSS 480 SKTLNILSAK VSEHTVNEAK KFSEKTSHTA SSWALLKQSV DENKISLHQA EEILFEQAIR 540 NRLQDWLLER IIEEQSPSDY DEQGLGVLHL CAILNYTWAV YLYSKSGLSL DFRDKYGWTA 600 LHWAAYYGRE DIVGALLSAG ARPNLVTDPT PLIPGGCTAS DLAAQKGHNG LAAYLGEEAL 660 VDHFNDMALA GNASGSIEFQ RTCSVKRETV YDEASCLKDT LAAYRTAADA AARINAAFRE 720 QSLKLRTEAV QGSNPEDEAR TIISAMKIQH AFRSFESRKK MAAALRIQYG FRTWKTRRDF 780 LNMRQQAIKI QAVFRGFQVR RHYRKIIWSV GVLEKAVLRW RFKRRGFRGL QVAPVQEITS 840 VAQEQENDVE EDFFVLGRKQ AEDRVESAVI KVQAMFRSKQ AQQEYRRMKL AHNQAKIEYE 900 GFFNHNAKME S*

Sequence ? help Back to Top

Protein Sequence Length: 912 aa Download sequence

MLCDYAELDL KSIFEEAKSR WLRPNEIHAI LFNHMYFPIH VKPVNLPKSG EIHLFDRKKL  60
RNFRKDGHNW KKKNDGKTVK EAHEHLKVGN EERIHVYYAH GQDNATFVRR CYWLLDKSME  120
HIVLVHYRET CELLDPSAAP VNSNSSSGLT ELHVPFLTYE ETESGSQQSN TSNQLEYIES  180
IENVTAVTLE RRLREINTLD WDELLVDTDP SVPIAYEEGK SGGVQQQNPV MINVSKDDGS  240
ALLMNLPTEL SSGWHSACPE TRSDSINGDI LDGSYNHAVH SQLMMEAAPN NSGTLFGGQS  300
FSITQGGGQD QDRRWMNSSL TVESPGSVND SIHESSISSA QNSMVPTIMD QPQSADQIFT  360
ITDISPEWAF SCEKTKILLT GYFHQGFGNL LNSNLYCVCG SSCVPVEIVQ TGVMRCILPP  420
HSPGQFDLYL STERLKPVSQ LKTFEYRSSL QADQNIPSDN LSEWDEFRNK MRLVRLLFSS  480
SKTLNILSAK VSEHTVNEAK KFSEKTSHTA SSWALLKQSV DENKISLHQA EEILFEQAIR  540
NRLQDWLLER IIEEQSPSDY DEQGLGVLHL CAILNYTWAV YLYSKSGLSL DFRDKYGWTA  600
LHWAAYYGRE DIVGALLSAG ARPNLVTDPT PLIPGGCTAS DLAAQKGHNG LAAYLGEEAL  660
VDHFNDMALA GNASGSIEFQ RTCSVKRETV YDEASCLKDT LAAYRTAADA AARINAAFRE  720
QSLKLRTEAV QGSNPEDEAR TIISAMKIQH AFRSFESRKK MAAALRIQYG FRTWKTRRDF  780
LNMRQQAIKI QAVFRGFQVR RHYRKIIWSV GVLEKAVLRW RFKRRGFRGL QVAPVQEITS  840
VAQEQENDVE EDFFVLGRKQ AEDRVESAVI KVQAMFRSKQ AQQEYRRMKL AHNQAKIEYE  900
GFFNHNAKME S*

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	57	73	RKKLRNFRKDGHNWKKK
2	58	74	RKKLRNFRKDGHNWKKK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G16150.1	0.0	CAMTA family protein