PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0019s0135.2.p
Organism
Kalanchoe fedtschenkoi
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family MIKC_MADS
Protein Properties Length: 196aa    MW: 22352.4 Da    PI: 10.406
Description MIKC_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0019s0135.2.pgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF98.72.4e-313079150
                         S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE CS
               SRF-TF  1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeys 50
                         krien++nrqvtf+kRrng+lKKA+ELSvLCdaeva+++fss+g+lyey+
  Kaladp0019s0135.2.p 30 KRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALVVFSSRGRLYEYA 79
                         79***********************************************8 PP
2K-box1064.5e-3597191498
                K-box   4 ssgksleeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenka 93 
                          ss++ + e++++ +qqe++kL k+i+++q+ +Rh++Ge +++L++keL++Le++Lek+l+++RskKn+ll++ ie +qk+e elq++n++
  Kaladp0019s0135.2.p  97 SSNTGTVETNTQFYQQEASKLGKQIREMQNANRHIQGEAIGNLTVKELKNLESRLEKGLSRVRSKKNDLLFADIEFMQKREMELQNANMY 186
                          667778999********************************************************************************* PP

                K-box  94 Lrkkl 98 
                          Lr+k+
  Kaladp0019s0135.2.p 187 LRAKV 191
                          **996 PP
Sequence ? help Back to Top
Protein Sequence    Length: 196 aa     Download sequence    
MEFPNFHHNQ SSEGSSSLRK LAGRGKIEIK RIENTTNRQV TFCKRRNGLL KKAYELSVLC  60
DAEVALVVFS SRGRLYEYAN NSVRSTIERY KKASADSSNT GTVETNTQFY QQEASKLGKQ  120
IREMQNANRH IQGEAIGNLT VKELKNLESR LEKGLSRVRS KKNDLLFADI EFMQKREMEL  180
QNANMYLRAK VPISI*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G58780.12e-99MIKC_MADS family protein