PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0019s0135.3.p
Organism
Kalanchoe fedtschenkoi
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family MIKC_MADS
Protein Properties Length: 249aa    MW: 28316.9 Da    PI: 9.6555
Description MIKC_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0019s0135.3.pgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF98.13.7e-313079150
                         S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE CS
               SRF-TF  1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeys 50
                         krien++nrqvtf+kRrng+lKKA+ELSvLCdaeva+++fss+g+lyey+
  Kaladp0019s0135.3.p 30 KRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALVVFSSRGRLYEYA 79
                         79***********************************************8 PP
2K-box105.94.9e-35971934100
                K-box   4 ssgksleeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenka 93 
                          ss++ + e++++ +qqe++kL k+i+++q+ +Rh++Ge +++L++keL++Le++Lek+l+++RskKn+ll++ ie +qk+e elq++n++
  Kaladp0019s0135.3.p  97 SSNTGTVETNTQFYQQEASKLGKQIREMQNANRHIQGEAIGNLTVKELKNLESRLEKGLSRVRSKKNDLLFADIEFMQKREMELQNANMY 186
                          666778999********************************************************************************* PP

                K-box  94 Lrkklee 100
                          Lr+k++e
  Kaladp0019s0135.3.p 187 LRAKIAE 193
                          ****986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 249 aa     Download sequence    
MEFPNFHHNQ SSEGSSSLRK LAGRGKIEIK RIENTTNRQV TFCKRRNGLL KKAYELSVLC  60
DAEVALVVFS SRGRLYEYAN NSVRSTIERY KKASADSSNT GTVETNTQFY QQEASKLGKQ  120
IREMQNANRH IQGEAIGNLT VKELKNLESR LEKGLSRVRS KKNDLLFADI EFMQKREMEL  180
QNANMYLRAK IAECERQQTS TVAGETIYET QQSNRNFLPV NLLEPDNSYT SQDQTALQLV  240
INHAALNL*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G58780.11e-118MIKC_MADS family protein