PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Kaladp0020s0154.1.p

Organism

Kalanchoe fedtschenkoi

Taxonomic ID

63787

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe

Family

FAR1

Protein Properties

Length: 562aa MW: 66507.7 Da PI: 9.95

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Kaladp0020s0154.1.p	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	81.2	1.8e-25	24	110	1	88
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHe 88 +fYn+YA GF +r++ ++ks++++ei++ +fvC+keg + ++k++ k ++ e rtgCkak++++++ +++w+v+k+e eHnH+ Kaladp0020s0154.1.p 24 DFYNHYALYHGFGIRINGHTKSRTSKEIIRWQFVCNKEGLKLKDKRQLGKDVKSYREMRTGCKAKMEISLK-SDEWVVDKFEDEHNHS 110 6********************************************************************.99***********6 PP

Sequence ? help Back to Top
Protein Sequence Length: 562 aa Download sequence
MTNTQGQNTL ILGRKFSSKD EVYDFYNHYA LYHGFGIRIN GHTKSRTSKE IIRWQFVCNK 60 EGLKLKDKRQ LGKDVKSYRE MRTGCKAKME ISLKSDEWVV DKFEDEHNHS PTTPSKVMKH 120 RYHNKFHRTP VVKNQCTSLT KKLLMPLAVV TKWTLLQNNV QIYYGQRKKI IRNQMGVHYF 180 AIDLASDGSL KSVFWADGRF RLAYAQFEDV LVFDVTYRTN HFNLPFAPFV EHLHSLCARF 240 DDFGETYTNW QKRNTIEEFE LDWEIIKQKY SIAKGRWLDN MYNLRVFWVK VYLKDCFTAG 300 VTTSGRSESM NSYFDGYVNS NTMLNDFVKQ YDKAVEARRI KEEEEDFRTI ESHAVSLTNY 360 PVEEHVARLY TRNLFEIFKL EWKKSFDYIH KKSNKGFNFV ECLVGKYGLD VKYWRLVNYK 420 SDKDLSLKCT CCKFEMEGIL CKHILYIVRK KNLEVIPNQY FLPRWTIGAR YKNNMANNSS 480 SSNRQAGTGA SPLTIWSIQR KFSMILEIGR KSSSDLQLLE SVLDTYIERW EIRRLLIMLK 540 KMVNVKAMQM HHLFLRMINV R*

Sequence ? help Back to Top

Protein Sequence Length: 562 aa Download sequence

MTNTQGQNTL ILGRKFSSKD EVYDFYNHYA LYHGFGIRIN GHTKSRTSKE IIRWQFVCNK  60
EGLKLKDKRQ LGKDVKSYRE MRTGCKAKME ISLKSDEWVV DKFEDEHNHS PTTPSKVMKH  120
RYHNKFHRTP VVKNQCTSLT KKLLMPLAVV TKWTLLQNNV QIYYGQRKKI IRNQMGVHYF  180
AIDLASDGSL KSVFWADGRF RLAYAQFEDV LVFDVTYRTN HFNLPFAPFV EHLHSLCARF  240
DDFGETYTNW QKRNTIEEFE LDWEIIKQKY SIAKGRWLDN MYNLRVFWVK VYLKDCFTAG  300
VTTSGRSESM NSYFDGYVNS NTMLNDFVKQ YDKAVEARRI KEEEEDFRTI ESHAVSLTNY  360
PVEEHVARLY TRNLFEIFKL EWKKSFDYIH KKSNKGFNFV ECLVGKYGLD VKYWRLVNYK  420
SDKDLSLKCT CCKFEMEGIL CKHILYIVRK KNLEVIPNQY FLPRWTIGAR YKNNMANNSS  480
SSNRQAGTGA SPLTIWSIQR KFSMILEIGR KSSSDLQLLE SVLDTYIERW EIRRLLIMLK  540
KMVNVKAMQM HHLFLRMINV R*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	3e-40	FAR1 family protein