PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0021s0045.1.p
Organism
Kalanchoe fedtschenkoi
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family NF-YA
Protein Properties Length: 212aa    MW: 23584.3 Da    PI: 10.0657
Description NF-YA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0021s0045.1.pgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1CBFB_NFYA100.12.2e-31118174158
            CBFB_NFYA   1 deplYVNaKQyqrIlkRRqkRakleeekkldeksrkpylheSRhkhAlrRpRgsgGrF 58 
                          +ep++VNaKQy++Il+RRq+Rak+e+e ++ ++srkpylheSRh hAlrR+Rg+gGrF
  Kaladp0021s0045.1.p 118 EEPVFVNAKQYHGILRRRQSRAKAESEYRV-ARSRKPYLHESRHLHALRRARGCGGRF 174
                          69****************************.**************************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 212 aa     Download sequence    
MTSSVHHYSV HTKKVCADHN DQTVGQQKQS DHRIQIAAAG TGISLHDATN NANVQFPAPS  60
HLGVGHAQAA YPYPDPYYRS IFVSHEAQPY SHQSMVHMHL MGIKQAGLPL PSEADAVEEP  120
VFVNAKQYHG ILRRRQSRAK AESEYRVARS RKPYLHESRH LHALRRARGC GGRFLNATKN  180
ENDKQKESTS ASNLQENMNF TNTRKGNALS P*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G30500.22e-46NF-YA family protein