PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0022s0030.1.p
Organism
Kalanchoe fedtschenkoi
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family HD-ZIP
Protein Properties Length: 816aa    MW: 88716.7 Da    PI: 6.1536
Description HD-ZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0022s0030.1.pgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox66.92.7e-21120175156
                          TT--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS
             Homeobox   1 rrkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 
                          +++ +++t++q++eLe+lF+++++p++++r +L+k+l+L++rqVk+WFqNrR+++k
  Kaladp0022s0030.1.p 120 KKRYHRHTPQQIQELEALFKECPHPDEKQRLHLSKRLNLETRQVKFWFQNRRTQMK 175
                          688999***********************************************999 PP
2START209.21.6e-653295521205
                          HHHHHHHHHHHHHHHHC-TT-EEEE....EXCCTTEEEEEEESSS......SCEEEEEEEECCSCHHHHHHHHHCCCGGCT-TT-S.... CS
                START   1 elaeeaaqelvkkalaeepgWvkss....esengdevlqkfeeskv.....dsgealrasgvvdmvlallveellddkeqWdetla.... 77 
                          e+a++a++el+k+a+++ep+W kss    e++n++e+l++f++  +     + +ea+r++gvv+ ++  lve+l+d+  +W e+++    
  Kaladp0022s0030.1.p 329 EVALAAMDELIKLAQSDEPLWIKSSdggrEILNREEYLRTFTPCMGmkpngYVTEASRETGVVIINSLALVETLMDSD-RWAEMFPcmia 417
                          6899*************************************9987799999***************************.*********** PP

                          EEEEEEEECTT......EEEEEEEEXXTTXX-SSX.EEEEEEEEEEE.TTS-EEEEEEEEE-TTS--.-TTSEE-EESSEEEEEEEECTC CS
                START  78 kaetlevissg......galqlmvaelqalsplvp.RdfvfvRyirqlgagdwvivdvSvdseqkppesssvvRaellpSgiliepksng 160
                          +a+t+evissg      g lqlm+aelq+lsplvp R+++f+R+++q+ +g+w++vdvS++s  + +  + +v++++lpSg+l+e+++ng
  Kaladp0022s0030.1.p 418 RAATIEVISSGmggtrnGSLQLMQAELQVLSPLVPvREVTFLRFCKQHAEGVWAVVDVSIESVHDTSGGPTYVKCRRLPSGCLLEDMPNG 507
                          *****************************************************************999********************** PP

                          EEEEEEEE-EE--SSXXHHHHHHHHHHHHHHHHHHHHHHTXXXXX CS
                START 161 hskvtwvehvdlkgrlphwllrslvksglaegaktwvatlqrqce 205
                           skvtwveh++++++ +h+l+r+lv+sgl +gak+wva l+rq +
  Kaladp0022s0030.1.p 508 CSKVTWVEHAEYDESEVHQLYRPLVSSGLGFGAKRWVAMLERQSQ 552
                          *****************************************9976 PP
Sequence ? help Back to Top
Protein Sequence    Length: 816 aa     Download sequence    
MSFGGYLDSD LHFNSSSGNT PGKGVMLSNG VFSQQLQQQQ RLADQTFTKS IFSSPALSLA  60
LQTGLEAQGE ALRIGDSCDG AVGVRRSREE EPESRSGSDN VDGGSGEDLD AADTNPSKKK  120
KRYHRHTPQQ IQELEALFKE CPHPDEKQRL HLSKRLNLET RQVKFWFQNR RTQMKTQIER  180
HENSLLRSDN DKLRVENMSL RDAMRNPGCI HCGGPAFIGE SSLEEQQLRL ENARLRDELE  240
RVCGLASKFL GQPVSAMGNT HVLQTGSNLE LCVGSNNCHG GPSASMPFGL DFAGEVFTSS  300
GVVVLNRSTI HNSNPSGMDK TLERSMLVEV ALAAMDELIK LAQSDEPLWI KSSDGGREIL  360
NREEYLRTFT PCMGMKPNGY VTEASRETGV VIINSLALVE TLMDSDRWAE MFPCMIARAA  420
TIEVISSGMG GTRNGSLQLM QAELQVLSPL VPVREVTFLR FCKQHAEGVW AVVDVSIESV  480
HDTSGGPTYV KCRRLPSGCL LEDMPNGCSK VTWVEHAEYD ESEVHQLYRP LVSSGLGFGA  540
KRWVAMLERQ SQCLAVLMSS AVPSGDNSAI TASGRKSMLK LAQRLTNNFC AGVCASTAHK  600
WNKLSSGDAG EEDIRVMTRK SINDPGEPPG VVLTAATSVW LPVPPQRIFD FLRNECLRSE  660
WDILSNGGPM QEMAHIAKGQ DPGNCVSLLR ASAMNPSQSS MLILQETCTD VAGSLVIYAP  720
VDIPAMHVVM NGGDSAYVAL LPSGFSILPD GSNPHTRTPS PNSKPSVEGS LLTVAFQILV  780
SSLPTARLTV ESVETVSNLI SCTVQKIKAA LNCKT*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G00730.10.0HD-ZIP family protein