PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0022s0049.1.p
Organism
Kalanchoe fedtschenkoi
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family MIKC_MADS
Protein Properties Length: 253aa    MW: 28877 Da    PI: 8.8623
Description MIKC_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0022s0049.1.pgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF83.81e-26961151
                         S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TT..SEEEEEE- CS
               SRF-TF  1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsst..gklyeyss 51
                         k+ienk nrqvtfskRr+g++KKA ELSvLCda++a+i+fs +  +klye++s
  Kaladp0022s0049.1.p  9 KKIENKVNRQVTFSKRRTGLFKKATELSVLCDAQIAIIVFSGDrpDKLYEFAS 61
                         68***************************************874579***986 PP
2K-box79.96.2e-27861731299
                K-box  12 akaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkkle 99 
                          ++a+s ++e++kL+++ e Lqr+qR+llGedLe+Ls+keL+ Le+q+e sl + R +K++++ e +e l+k+e+ l e+nk+L++k +
  Kaladp0022s0049.1.p  86 REAQSAYHEVQKLQAKCEALQRTQRNLLGEDLEPLSIKELHALEKQIEVSLAQTRLRKTQVVNERMESLRKQERHLGEINKKLKMKKM 173
                          57899*******************************************************************************9976 PP
Sequence ? help Back to Top
Protein Sequence    Length: 253 aa     Download sequence    
MGRGRIEHKK IENKVNRQVT FSKRRTGLFK KATELSVLCD AQIAIIVFSG DRPDKLYEFA  60
SPGQRIGKIL ERYQSMVAPP PGGLHREAQS AYHEVQKLQA KCEALQRTQR NLLGEDLEPL  120
SIKELHALEK QIEVSLAQTR LRKTQVVNER MESLRKQERH LGEINKKLKM KKMEIEAEGE  180
AYHALWNTYN ASASAGTNFP LQPTHPNLME CEMAEPVLEM GYPQNHYVRE EGTTSRANNV  240
VDELNFIQGW HC*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G45650.14e-83MIKC_MADS family protein