PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0022s0108.1.p
Organism
Kalanchoe fedtschenkoi
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family M-type_MADS
Protein Properties Length: 207aa    MW: 22999.5 Da    PI: 8.8182
Description M-type_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0022s0108.1.pgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF67.99.9e-221762247
                         ---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEE CS
               SRF-TF  2 rienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgkly 47
                         +i++ks+ qvtfskR +g++KKA+EL++LC++e+a+i+fs+ gk +
  Kaladp0022s0108.1.p 17 KIKSKSQLQVTFSKRCAGLFKKASELCTLCGVEIAIIVFSPAGKPF 62
                         69****************************************9855 PP
Sequence ? help Back to Top
Protein Sequence    Length: 207 aa     Download sequence    
MPTRKPSLGR QRVEMTKIKS KSQLQVTFSK RCAGLFKKAS ELCTLCGVEI AIIVFSPAGK  60
PFSFGHPSVE SIVNKFINQS GSKAITPPQA LTPVEPRPAK AGELNQHLRW LLEQQELEKK  120
KAEMLDELRQ AGQTQFWWEA PVDSLALHEL QQLQAALEEL KKNVASFTSN PWPSFTSSPQ  180
VSPDAYEYVP APTYPIPSPM TELGFY*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G24840.13e-38M-type_MADS family protein