PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0022s0158.1.p
Organism
Kalanchoe fedtschenkoi
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family WRKY
Protein Properties Length: 350aa    MW: 38950 Da    PI: 6.7
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0022s0158.1.pgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY87.98.7e-28114175159
                          ---SS-EEEEEEE--TT-SS-EEEEEE-ST...T---EEEEEE-SSSTTEEEEEEES--SS- CS
                 WRKY   1 ldDgynWrKYGqKevkgsefprsYYrCtsa...gCpvkkkversaedpkvveitYegeHnhe 59 
                          ldDg++WrKYGqK++ g+ +pr+YYrCt++   gC ++k+v+rs++dp+++++tY+g+H+++
  Kaladp0022s0158.1.p 114 LDDGHSWRKYGQKDILGAIHPRGYYRCTHRhvqGCLATKQVQRSDQDPTIFHVTYRGQHTCT 175
                          59***************************99999**************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 350 aa     Download sequence    
MEANSPAWEQ QALINELKQG RELAKQLQNH LNPSTASSET RLFLVQKIIS SYEKTLTKLN  60
PSNNSSKNNN SPRSQGSSHQ HYSTHQDASK KRKAMPKWIE QVQVKSETGL ESPLDDGHSW  120
RKYGQKDILG AIHPRGYYRC THRHVQGCLA TKQVQRSDQD PTIFHVTYRG QHTCTKSANS  180
SPNKPSEQQK RRKTDHTSDQ LRFSFGVKNE ERSPLEEQVF PTFSSFPSTS SGNKPDDYVF  240
MLTSAAEAET EDQFIMCAAE GSSFSPLYIS SATSDTDFYP PCHVPGGLGL SHLNVQISEF  300
EAAGSCLNFG TNSPMGVLDL DLDFPVRSAT STTAMDFDSS FPFGFLDYD*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G23810.13e-46WRKY family protein