PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Kaladp0022s0225.2.p

Organism

Kalanchoe fedtschenkoi

Taxonomic ID

63787

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe

Family

NAC

Protein Properties

Length: 380aa MW: 42610.5 Da PI: 5.8224

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Kaladp0022s0225.2.p	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	101.8	9.4e-32	55	194	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkk....leleevikevd....iykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratk... 79 lp+G++F+P+d el+ e+L++k+ + + ++e+i+++d i+ ++P++Lp +k++ ++++fF++++++yatg+rk+r+++ Kaladp0022s0225.2.p 55 LPVGVKFDPSDLELI-EHLTAKCGLGNstshVFIDEFIPTLDgdqgICCTHPENLP-GAKKDGSSIHFFHRTANAYATGQRKRRKIQtql 142 799**********.899999876664554333345666655667******.556778899**************744346 PP NAM 80 ..sgyWkatgkdkevlskkgelvglkktLvfy..kgrapkgektdWvmheyrl 128 + +W++tgk+k+v++ +g ++g+kk++v+y + + k+ k++Wvmh+y+l Kaladp0022s0225.2.p 143 dkQVRWHKTGKTKPVFE-NGIQKGCKKIMVLYysSRKGFKPDKANWVMHQYHL 194 66999********.99******996544566778*******98 PP

Sequence ? help Back to Top
Protein Sequence Length: 380 aa Download sequence
MARTWIIDNI SIARKVKHGS KSPPLQIIDS GASRECPQCH YIIDNNDVIN EWPGLPVGVK 60 FDPSDLELIE HLTAKCGLGN STSHVFIDEF IPTLDGDQGI CCTHPENLPG AKKDGSSIHF 120 FHRTANAYAT GQRKRRKIQT QLDKQVRWHK TGKTKPVFEN GIQKGCKKIM VLYYSSRKGF 180 KPDKANWVMH QYHLGTDEEE KEGELVVSKI FYQHPKQNEY NDSSPVIKDC DVVQQHSSPK 240 TPKPTKRHRQ YSGTYTWDDD DADASTPFTV PEPALNPTIY DAHQPAIQMG DSEHTTWLAG 300 ESEAAEQLGL NDFDEYLLCK EIIGSYAPFK DPGPSRATYS YLDGNQSNLT EDNHISSGFA 360 DLENLELDTP PDFQLTVSC*

Sequence ? help Back to Top

Protein Sequence Length: 380 aa Download sequence

MARTWIIDNI SIARKVKHGS KSPPLQIIDS GASRECPQCH YIIDNNDVIN EWPGLPVGVK  60
FDPSDLELIE HLTAKCGLGN STSHVFIDEF IPTLDGDQGI CCTHPENLPG AKKDGSSIHF  120
FHRTANAYAT GQRKRRKIQT QLDKQVRWHK TGKTKPVFEN GIQKGCKKIM VLYYSSRKGF  180
KPDKANWVMH QYHLGTDEEE KEGELVVSKI FYQHPKQNEY NDSSPVIKDC DVVQQHSSPK  240
TPKPTKRHRQ YSGTYTWDDD DADASTPFTV PEPALNPTIY DAHQPAIQMG DSEHTTWLAG  300
ESEAAEQLGL NDFDEYLLCK EIIGSYAPFK DPGPSRATYS YLDGNQSNLT EDNHISSGFA  360
DLENLELDTP PDFQLTVSC*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G01600.1	4e-95	NAC family protein