PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0023s0004.1.p
Organism
Kalanchoe fedtschenkoi
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family LBD
Protein Properties Length: 222aa    MW: 23820.7 Da    PI: 6.9251
Description LBD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0023s0004.1.pgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF260141.52.6e-4414112199
               DUF260   1 aCaaCkvlrrkCakdCvlapyfpaeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleql 90 
                          +CaaCk+lrrkC ++C++apyfp e+p+kfanvhk+FGasnv+kll++l +++reda++sl+yeAear++dPvyG+vg i+ lq+q+++l
  Kaladp0023s0004.1.p  14 PCAACKFLRRKCLPGCIFAPYFPPEEPQKFANVHKIFGASNVTKLLNELLPHQREDAVNSLAYEAEARVKDPVYGCVGAISFLQRQVQHL 103
                          7***************************************************************************************** PP

               DUF260  91 kaelallke 99 
                          ++el+++++
  Kaladp0023s0004.1.p 104 QKELDAANA 112
                          ****99876 PP
Sequence ? help Back to Top
Protein Sequence    Length: 222 aa     Download sequence    
MPMATSSSSA YSSPCAACKF LRRKCLPGCI FAPYFPPEEP QKFANVHKIF GASNVTKLLN  60
ELLPHQREDA VNSLAYEAEA RVKDPVYGCV GAISFLQRQV QHLQKELDAA NADLIRMACS  120
DHHCYHHIPA ALPVSAASSG MQIQQQGALN SGFQSNMRQV ERSEYGRRSA FGGGGAGMMD  180
HGSSLYQNPT STGGFNFAFA LPWSDSTGQV NDGSLGDQGD I*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G63090.25e-65LBD family protein