PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0023s0075.1.p
Organism
Kalanchoe fedtschenkoi
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family HD-ZIP
Protein Properties Length: 252aa    MW: 28176.1 Da    PI: 9.4345
Description HD-ZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0023s0075.1.pgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox60.62.5e-19114168256
                          T--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS
             Homeobox   2 rkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 
                          rk+ +++k+q ++Lee F+++++++ ++++ LA++l+L+ rqV vWFqNrRa+ k
  Kaladp0023s0075.1.p 114 RKKLRLKKDQAQVLEERFKQQSTLNPKQKQALARQLNLSPRQVEVWFQNRRARTK 168
                          6778899**********************************************98 PP
2HD-ZIP_I/II118.92.8e-38114202190
          HD-ZIP_I/II   1 ekkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLree 90 
                          +kk+rl+k+q+++LEe F+++++L+p++K++lar+L+l+prqv+vWFqnrRARtk+kq+E+dye+Lk+++++l+een+rL ke +eL+ +
  Kaladp0023s0075.1.p 114 RKKLRLKKDQAQVLEERFKQQSTLNPKQKQALARQLNLSPRQVEVWFQNRRARTKLKQTEQDYEYLKKCCETLTEENRRLIKELKELK-A 202
                          69*************************************************************************************9.4 PP
Sequence ? help Back to Top
Protein Sequence    Length: 252 aa     Download sequence    
MDYHGCSNIG LNLKLGSEFA GHPPRTLTHI NLNRKNDQAL MKPCFELPLL SLGLGHHEDG  60
GNQVDQGIVV KPGIKGETSG QSTVSSFSNS GLSVKRERSY EDEDYNCFSN DGVRKKLRLK  120
KDQAQVLEER FKQQSTLNPK QKQALARQLN LSPRQVEVWF QNRRARTKLK QTEQDYEYLK  180
KCCETLTEEN RRLIKELKEL KALKPAQPNC ITLPAATLSI CPSCEGVKTT PARGDCPAKP  240
KFFNTAPSAA Y*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1163171RRARTKLKQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G37790.12e-45HD-ZIP family protein