PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0024s0032.1.p
Organism
Kalanchoe fedtschenkoi
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family bHLH
Protein Properties Length: 250aa    MW: 27786.2 Da    PI: 9.9339
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0024s0032.1.pgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH41.13.2e-1365116154
                          CHHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
                  HLH   1 rrrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                          r+  hn+ Er RR++iN+ ++ Lr+llP +  ++s+++s  +++ ++ +YI +L
  Kaladp0024s0032.1.p  65 RKLHHNASERHRRKKINELYSSLRSLLPAS--EQSRRMSIPTTVSRVLKYIPEL 116
                          6789*************************6..5******************988 PP
Sequence ? help Back to Top
Protein Sequence    Length: 250 aa     Download sequence    
MLSVSSSSSA AMFGWPLEKA VYSYNMNHGF YDHTGGELAA AAHTDRPGNF APDGDRIDGK  60
SGERRKLHHN ASERHRRKKI NELYSSLRSL LPASEQSRRM SIPTTVSRVL KYIPELREEV  120
ARMEKRKQVM SKKMDKVRES VSSLSSKSTG PGHHGQEVTG REEEAKAQHM TMENSNNRSS  180
VSTSQVADRE VVIQISTVRV SVSEILSSLE GDGFQLINAS SSESHGGRLF LNLHLLNFRV  240
DSYWIVSPL*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
16479RRKLHHNASERHRRKK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G56970.11e-36bHLH family protein