PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0024s0035.1.p
Organism
Kalanchoe fedtschenkoi
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family bHLH
Protein Properties Length: 262aa    MW: 29272.9 Da    PI: 9.5986
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0024s0035.1.pgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH43.27.1e-1465117155
                          CHHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
                  HLH   1 rrrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                          r+  hn+ Er RR++iN+ ++ Lr+llP +  ++s+++s  +++ ++ +YI +Lq
  Kaladp0024s0035.1.p  65 RKLHHNASERHRRKKINELYSSLRSLLPAS--EQSRRMSIPTTVSRVLKYIPELQ 117
                          6789*************************6..5*******************998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 262 aa     Download sequence    
MLSVSSSSSA AMFGWPLEEA VYSYNMHHGF YDHTGVELAA AAHTDRPENF APDGDRIDGK  60
SGERRKLHHN ASERHRRKKI NELYSSLRSL LPASEQSRRM SIPTTVSRVL KYIPELQEEV  120
ARMEKRKQVM SKKMDKVRES VSSLSSKSTV PGHSGQEVNG REEEAKAQRM TMENSNNRSS  180
VSTSQVADRE VVIQISTVRV SVSEILSSLE GDGFQLINAS SSESHGGRLF LNLHLQKLDG  240
IRNAECQGLE KKLLFMVENK R*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
16479RRKLHHNASERHRRKK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G56970.16e-45bHLH family protein