PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0024s0152.1.p
Organism
Kalanchoe fedtschenkoi
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family MIKC_MADS
Protein Properties Length: 258aa    MW: 29651.6 Da    PI: 8.7069
Description MIKC_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0024s0152.1.pgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF98.13.7e-31959151
                         S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS
               SRF-TF  1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51
                         krienk+nrqvtfskRr+g+lKKA+E+SvLCdaeva+i+fss+gkl+eys+
  Kaladp0024s0152.1.p  9 KRIENKINRQVTFSKRRTGLLKKAHEISVLCDAEVALIVFSSKGKLFEYST 59
                         79***********************************************96 PP
2K-box103.33.1e-34851769100
                K-box   9 leeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkkl 98 
                          + +  +e+++ e++k+k+++e Lqr+qRh+lGe+LesLsl+eLq+Leq L+ +lk+iRs+Kn+l++e+i+elqkkek++qe+n+ L kk+
  Kaladp0024s0152.1.p  85 QPNPSQENWSLEYTKMKSKLELLQRNQRHYLGEELESLSLRELQNLEQSLDAGLKHIRSRKNQLMHESISELQKKEKAMQEQNNLLAKKI 174
                          6677899**********************************************************************************9 PP

                K-box  99 ee 100
                          +e
  Kaladp0024s0152.1.p 175 KE 176
                          87 PP
Sequence ? help Back to Top
Protein Sequence    Length: 258 aa     Download sequence    
MGRGRVQLKR IENKINRQVT FSKRRTGLLK KAHEISVLCD AEVALIVFSS KGKLFEYSTD  60
SCMEKILERY ERYSYAERQL AGIEQPNPSQ ENWSLEYTKM KSKLELLQRN QRHYLGEELE  120
SLSLRELQNL EQSLDAGLKH IRSRKNQLMH ESISELQKKE KAMQEQNNLL AKKIKENEKT  180
MGQQAQWGHQ PHQQNHGHGH GHGASAFIIP QTLPCLNMGI PYQGEVEHVR QHHNNNNDLD  240
LTLEPIFGCN NLGCFAG*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G69120.12e-90MIKC_MADS family protein