PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0024s0154.1.p
Organism
Kalanchoe fedtschenkoi
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family YABBY
Protein Properties Length: 205aa    MW: 22322.3 Da    PI: 8.7572
Description YABBY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0024s0154.1.pgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1YABBY141.59.4e-44371776163
                YABBY   6 sseqvCyvqCnfCntilavsvPstslfkvvtvrCGhCtsllsvnlakasqllaaeshldeslkeelleelkveeenlksnvekeesasts 95 
                           s++ Cyv+CnfC+t+lav +P + l+++vtv+CGhC++l  ++ +      + +         + l++++ + + +   + k+  +s+s
  Kaladp0024s0154.1.p  37 PSDHFCYVRCNFCSTVLAVGIPCKRLMETVTVKCGHCSNLSFLSTRP-----PLQ--------GQCLDHHQISPQGFCPPELKKGPSSSS 113
                          79************************************975432222.....222........235666778888888888877777766 PP

                YABBY  96 vsseklsenedeevprvppvirPPekrqrvPsaynrfikeeiqrikasnPdishreafsaaaknWahf 163
                           ss    ++++  +p++p v++PPek+ r Psaynrf+keeiqrika+nP+i hreafs+aaknWa +
  Kaladp0024s0154.1.p 114 SSS----TSSEPVSPKAPFVVKPPEKKHRLPSAYNRFMKEEIQRIKAANPEIPHREAFSTAAKNWARY 177
                          655....66788999*9*************************************************86 PP
Sequence ? help Back to Top
Protein Sequence    Length: 205 aa     Download sequence    
MSGSSAPSSP PSFNLSMNFE DAPQTKDPMD SNLVPPPSDH FCYVRCNFCS TVLAVGIPCK  60
RLMETVTVKC GHCSNLSFLS TRPPLQGQCL DHHQISPQGF CPPELKKGPS SSSSSSTSSE  120
PVSPKAPFVV KPPEKKHRLP SAYNRFMKEE IQRIKAANPE IPHREAFSTA AKNWARYVPN  180
SPSRSNAESS NNAGLDFAGM KFYM*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G69180.13e-63YABBY family protein