PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0024s0259.2.p
Organism
Kalanchoe fedtschenkoi
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family C3H
Protein Properties Length: 331aa    MW: 37451.6 Da    PI: 7.0983
Description C3H family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0024s0259.2.pgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-CCCH38.22.5e-12192217126
                          --S---SGGGGTS--TTTTT-SS-SS CS
              zf-CCCH   1 yktelCrffartGtCkyGdrCkFaHg 26 
                          y   +C+++ +tG+C yGd+CkF+H+
  Kaladp0024s0259.2.p 192 YQPDICKDYKETGYCGYGDSCKFMHD 217
                          67789********************7 PP
Sequence ? help Back to Top
Protein Sequence    Length: 331 aa     Download sequence    
MSEPKDQPDS AQRQPEPVCK FVKASARNKN FRKRTHDEDG VEDDEKGVES AVLSKRKQQK  60
DKGLIFSTGG SKQAADADNE GGDAKQPIFQ FESSKEIQVQ HDNKATATLE TETDFSMDAR  120
AIRERVLKQA EEALKGKKKG EGDEKLYKGI HGYTDYKAGF RREHTISSEK AGGSHGPLRA  180
SAHIRVSARF DYQPDICKDY KETGYCGYGD SCKFMHDRGD YKSGWQMERE WDEAEKERKR  240
KLALKALNSD EEDDEPSDED DDEDGLPFAC FICRKSFVDP VVTTCKHYFC EHCALKHHSK  300
NKKCFVCNKP TLGIFNTAHE IRKRMASQGK *
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G01350.11e-128C3H family protein