PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0024s0331.1.p
Organism
Kalanchoe fedtschenkoi
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family NF-YA
Protein Properties Length: 347aa    MW: 37783 Da    PI: 9.856
Description NF-YA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0024s0331.1.pgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1CBFB_NFYA102.83.3e-32170226158
            CBFB_NFYA   1 deplYVNaKQyqrIlkRRqkRakleeekkldeksrkpylheSRhkhAlrRpRgsgGrF 58 
                          +ep+YVNaKQy++I++RRq Rak+e ekk+  k++kpylheSRh+hA+rR+Rg+gGrF
  Kaladp0024s0331.1.p 170 EEPVYVNAKQYNGIMRRRQIRAKAELEKKV-VKNKKPYLHESRHQHAMRRARGCGGRF 226
                          69****************************.**************************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 347 aa     Download sequence    
MMQMKVERGN QRVDADAHGP SASAGFSQPW LQGYGNSDNS PTGISERSLR STSENINVVT  60
DGAINSQVTS GMNIAGHFNK DIPSGIALLP DGYSGQESQT LTTSQSIMSE NHSESSQREL  120
VGHSMVMASY PYQDLSYGAI VPPYGQQPLV HPHLYAVNQA RMPLPLEMEE EPVYVNAKQY  180
NGIMRRRQIR AKAELEKKVV KNKKPYLHES RHQHAMRRAR GCGGRFLNTK KLNSDTSKST  240
SGGHGTRDDG TISNQSILPR VPGNLPANNS SGYLRPPAEP HNSSLIQDAG KAHNIVSFGN  300
SNNINNIGHG RSSAYQTQAG DTQAYSSQLR ESMRMAGPPR RAFPIT*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G12840.29e-34NF-YA family protein