PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0024s0389.1.p
Organism
Kalanchoe fedtschenkoi
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family LBD
Protein Properties Length: 221aa    MW: 24003.2 Da    PI: 5.2597
Description LBD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0024s0389.1.pgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF260132.41.8e-41541531100
               DUF260   1 aCaaCkvlrrkCakdCvlapyfpaeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleql 90 
                          +CaaCk+lrr+C ++C lapyfp ++p kf ++h++FGasn++k+l++lpe++r da+ss+vye+ ar+rdPvyG++g i +lq+q+++l
  Kaladp0024s0389.1.p  54 PCAACKILRRRCDDKCLLAPYFPPSDPLKFTIAHRVFGASNIIKFLQELPESQRADAVSSMVYEGTARLRDPVYGCAGAICHLQRQVSEL 143
                          7***************************************************************************************** PP

               DUF260  91 kaelallkee 100
                          +aela++++e
  Kaladp0024s0389.1.p 144 QAELAKAHAE 153
                          ******9987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 221 aa     Download sequence    
MESSSGKTAP PTLSITPTTF NSSLSSSSSP PLSHSSPSTL MLPPPQSQVI VMSPCAACKI  60
LRRRCDDKCL LAPYFPPSDP LKFTIAHRVF GASNIIKFLQ ELPESQRADA VSSMVYEGTA  120
RLRDPVYGCA GAICHLQRQV SELQAELAKA HAEILTIQVQ KENRLASICT DDDQDQPTTI  180
SYGQCADVNQ NDELYGVASC MDPSVRASNL ESLWHDLREF *
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G07900.15e-68LBD family protein