PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0024s0392.1.p
Organism
Kalanchoe fedtschenkoi
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family NF-YB
Protein Properties Length: 181aa    MW: 19452.6 Da    PI: 6.5171
Description NF-YB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0024s0392.1.pgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NF-YB179.92.2e-5626123198
                NF-YB   1 vreqdrflPianvsrimkkvlPanakiskdaketvqecvsefisfvtseasdkcqrekrktingddllwalatlGfedyveplkvylkky 90 
                          vreqdr+lPian+srimkk+lP n+ki+kdak+tvqecvsefisf+tseasdkcq+ekrktingddll+a++tlGfedy+eplkvyl +y
  Kaladp0024s0392.1.p  26 VREQDRYLPIANISRIMKKALPPNGKIAKDAKDTVQECVSEFISFITSEASDKCQKEKRKTINGDDLLYAMSTLGFEDYIEPLKVYLGRY 115
                          69**************************************************************************************** PP

                NF-YB  91 relegekk 98 
                          releg++k
  Kaladp0024s0392.1.p 116 RELEGDTK 123
                          *****975 PP
Sequence ? help Back to Top
Protein Sequence    Length: 181 aa     Download sequence    
MADAPNSPTA GSHDSGGGDH SPRPNVREQD RYLPIANISR IMKKALPPNG KIAKDAKDTV  60
QECVSEFISF ITSEASDKCQ KEKRKTINGD DLLYAMSTLG FEDYIEPLKV YLGRYRELEG  120
DTKGSVRGEG SARKDAGGGH INSSAQLPLQ GSFTQPINYM NSQSSTQHLV GPSMPGSGYD  180
*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G53340.12e-73NF-YB family protein