PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0024s0397.1.p
Organism
Kalanchoe fedtschenkoi
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family MIKC_MADS
Protein Properties Length: 199aa    MW: 22580.1 Da    PI: 7.216
Description MIKC_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0024s0397.1.pgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF831.9e-26959151
                         S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS
               SRF-TF  1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51
                         krien   rqvtf+kRr+gilKKA+ELSvLCdae+ v ifs +gkl+ey+s
  Kaladp0024s0397.1.p  9 KRIENPVHRQVTFCKRRAGILKKAKELSVLCDAEIGVFIFSAHGKLFEYAS 59
                         79***********************************************86 PP
2K-box60.85.3e-219117615100
                K-box  15 eslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkklee 100
                          +   +e++ Lkkeie+Lq+  R + G + +++++ eL+  e++Le  + +iRs+K+e ++++ie+l++ke  l+ +n  L++k+ e
  Kaladp0024s0397.1.p  91 KDAIEEINMLKKEIESLQQVMRFMFGGGTGTMNVDELHVQEKHLEALIYHIRSTKMEAMFQEIETLKNKEGVLKAANSFLQQKMHE 176
                          455689****************************************************************************9875 PP
Sequence ? help Back to Top
Protein Sequence    Length: 199 aa     Download sequence    
MARGKVQMKR IENPVHRQVT FCKRRAGILK KAKELSVLCD AEIGVFIFSA HGKLFEYASK  60
GDMQGLIDRY TKSTTGETPL HQETEYSAFQ KDAIEEINML KKEIESLQQV MRFMFGGGTG  120
TMNVDELHVQ EKHLEALIYH IRSTKMEAMF QEIETLKNKE GVLKAANSFL QQKMHERVEE  180
MAADDFAALA ASVQFPIF*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G71692.15e-59MIKC_MADS family protein