PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Kaladp0024s0417.1.p

Organism

Kalanchoe fedtschenkoi

Taxonomic ID

63787

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe

Family

WRKY

Protein Properties

Length: 506aa MW: 55713.8 Da PI: 7.2739

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Kaladp0024s0417.1.p	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	103.9	8.7e-33	179	237	1	60
---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS-- CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhek 60 ldDgynWrKYGqK+vkgse+prsYY+Ct+++Cp+kkkvers +++++ei+Y+g+Hnh+k Kaladp0024s0417.1.p 179 LDDGYNWRKYGQKSVKGSENPRSYYKCTFTNCPTKKKVERSL-EGHITEIVYKGSHNHPK 237 59**************************************.*************85 PP
2	WRKY	105.3	3.3e-33	334	392	1	59
---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 ldDgy+WrKYGqK+vkg+++prsYY+Ct+ gCpv+k+ver+++d k v++tYeg+Hnh+ Kaladp0024s0417.1.p 334 LDDGYRWRKYGQKVVKGNPNPRSYYKCTFFGCPVRKHVERASQDLKSVITTYEGKHNHD 392 59********************************************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 506 aa Download sequence
MDNGGGGWEL QTSSSNTDGV PKFKSFLPPS LQPTSLFSPT SSFLNSFSPS QFLDSPVLFS 60 STSNVLASPT TGTFDWRNSS LDAMKAEQDE NNYSNFSFQP QTTSSIYDQQ TSAAFMDDTM 120 SKQLEWSFNT HPKQTDLSSN VIQTAAQAES RPMQTNSNMQ NGTAVASSRT NIGGKQRRLD 180 DGYNWRKYGQ KSVKGSENPR SYYKCTFTNC PTKKKVERSL EGHITEIVYK GSHNHPKPQS 240 TRRSSSSSLY GCCESENGRT ESGGTPENSS TSMGEDEFEH GSPLSKSGDD NDVNEPDSKR 300 WKGENEIESA AGSGSRTVRE PRIVVQTTSE IDILDDGYRW RKYGQKVVKG NPNPRSYYKC 360 TFFGCPVRKH VERASQDLKS VITTYEGKHN HDVPAARGSH SYSMIKPSSS ANAPLAIRPT 420 AATVSSANHT SNYSNSLQAS RPSLQTTTSQ APFTLEMMQD PGSFGFSGFG KPSCNYGSQP 480 QTDSFFSRAK EEPKDDQFFF DQFLS*

Sequence ? help Back to Top

Protein Sequence Length: 506 aa Download sequence

MDNGGGGWEL QTSSSNTDGV PKFKSFLPPS LQPTSLFSPT SSFLNSFSPS QFLDSPVLFS  60
STSNVLASPT TGTFDWRNSS LDAMKAEQDE NNYSNFSFQP QTTSSIYDQQ TSAAFMDDTM  120
SKQLEWSFNT HPKQTDLSSN VIQTAAQAES RPMQTNSNMQ NGTAVASSRT NIGGKQRRLD  180
DGYNWRKYGQ KSVKGSENPR SYYKCTFTNC PTKKKVERSL EGHITEIVYK GSHNHPKPQS  240
TRRSSSSSLY GCCESENGRT ESGGTPENSS TSMGEDEFEH GSPLSKSGDD NDVNEPDSKR  300
WKGENEIESA AGSGSRTVRE PRIVVQTTSE IDILDDGYRW RKYGQKVVKG NPNPRSYYKC  360
TFFGCPVRKH VERASQDLKS VITTYEGKHN HDVPAARGSH SYSMIKPSSS ANAPLAIRPT  420
AATVSSANHT SNYSNSLQAS RPSLQTTTSQ APFTLEMMQD PGSFGFSGFG KPSCNYGSQP  480
QTDSFFSRAK EEPKDDQFFF DQFLS*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G38470.1	1e-128	WRKY family protein