PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Kaladp0024s0417.3.p

Organism

Kalanchoe fedtschenkoi

Taxonomic ID

63787

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe

Family

WRKY

Protein Properties

Length: 387aa MW: 42796.9 Da PI: 8.9321

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Kaladp0024s0417.3.p	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	104.4	5.9e-33	60	118	1	60
---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS-- CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhek 60 ldDgynWrKYGqK+vkgse+prsYY+Ct+++Cp+kkkvers +++++ei+Y+g+Hnh+k Kaladp0024s0417.3.p 60 LDDGYNWRKYGQKSVKGSENPRSYYKCTFTNCPTKKKVERSL-EGHITEIVYKGSHNHPK 118 59**************************************.*************85 PP
2	WRKY	105.8	2.2e-33	215	273	1	59
---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 ldDgy+WrKYGqK+vkg+++prsYY+Ct+ gCpv+k+ver+++d k v++tYeg+Hnh+ Kaladp0024s0417.3.p 215 LDDGYRWRKYGQKVVKGNPNPRSYYKCTFFGCPVRKHVERASQDLKSVITTYEGKHNHD 273 59********************************************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 387 aa Download sequence
MSKQLEWSFN THPKQTDLSS NVIQTAAQAE SRPMQTNSNM QNGTAVASSR TNIGGKQRRL 60 DDGYNWRKYG QKSVKGSENP RSYYKCTFTN CPTKKKVERS LEGHITEIVY KGSHNHPKPQ 120 STRRSSSSSL YGCCESENGR TESGGTPENS STSMGEDEFE HGSPLSKSGD DNDVNEPDSK 180 RWKGENEIES AAGSGSRTVR EPRIVVQTTS EIDILDDGYR WRKYGQKVVK GNPNPRSYYK 240 CTFFGCPVRK HVERASQDLK SVITTYEGKH NHDVPAARGS HSYSMIKPSS SANAPLAIRP 300 TAATVSSANH TSNYSNSLQA SRPSLQTTTS QAPFTLEMMQ DPGSFGFSGF GKPSCNYGSQ 360 PQTDSFFSRA KEEPKDDQFF FDQFLS*

Sequence ? help Back to Top

Protein Sequence Length: 387 aa Download sequence

MSKQLEWSFN THPKQTDLSS NVIQTAAQAE SRPMQTNSNM QNGTAVASSR TNIGGKQRRL  60
DDGYNWRKYG QKSVKGSENP RSYYKCTFTN CPTKKKVERS LEGHITEIVY KGSHNHPKPQ  120
STRRSSSSSL YGCCESENGR TESGGTPENS STSMGEDEFE HGSPLSKSGD DNDVNEPDSK  180
RWKGENEIES AAGSGSRTVR EPRIVVQTTS EIDILDDGYR WRKYGQKVVK GNPNPRSYYK  240
CTFFGCPVRK HVERASQDLK SVITTYEGKH NHDVPAARGS HSYSMIKPSS SANAPLAIRP  300
TAATVSSANH TSNYSNSLQA SRPSLQTTTS QAPFTLEMMQ DPGSFGFSGF GKPSCNYGSQ  360
PQTDSFFSRA KEEPKDDQFF FDQFLS*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G38470.1	1e-119	WRKY family protein