PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0024s0501.1.p
Organism
Kalanchoe fedtschenkoi
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family HD-ZIP
Protein Properties Length: 310aa    MW: 34681 Da    PI: 4.2042
Description HD-ZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0024s0501.1.pgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox59.94.1e-1957110356
                          --SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS
             Homeobox   3 kRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 
                          k+++++ +q+++Le+ Fe ++++  e++ +LA++lgL+ rqV vWFqNrRa++k
  Kaladp0024s0501.1.p  57 KKRRLSVHQVKALEKNFEVENKLEPERKVKLAQELGLQPRQVAVWFQNRRARWK 110
                          56689************************************************9 PP
2HD-ZIP_I/II128.62.6e-4156148193
          HD-ZIP_I/II   1 ekkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLree 90 
                          ekkrrls +qvk+LE++Fe e+kLeperKv+la+eLglqprqvavWFqnrRAR+ktkqlE+dy +Lk++yd+lk + ++L++++++L +e
  Kaladp0024s0501.1.p  56 EKKRRLSVHQVKALEKNFEVENKLEPERKVKLAQELGLQPRQVAVWFQNRRARWKTKQLERDYGVLKSNYDNLKLNFDALQRDKDSLLKE 145
                          69*************************************************************************************999 PP

          HD-ZIP_I/II  91 lke 93 
                          +++
  Kaladp0024s0501.1.p 146 IRD 148
                          875 PP
Sequence ? help Back to Top
Protein Sequence    Length: 310 aa     Download sequence    
MKRLSSSDSL GALMSICPNS DEQGQQQQGH VYSREFQSML DGLDSDGCVE ESQASEKKRR  60
LSVHQVKALE KNFEVENKLE PERKVKLAQE LGLQPRQVAV WFQNRRARWK TKQLERDYGV  120
LKSNYDNLKL NFDALQRDKD SLLKEIRDLK SKLSQETPDQ SNNLPVKEEE DYEEEEDFEE  180
DDADDTELII SEPPQNAAAT AMLNDSSGVV SLFPDLGGFT TTTTTTTTTT SSADSDSSAI  240
LNDSKGSPNG AVSSGALQNV MLTTSSCSEY HPEFVKMEEQ SLFGGEESCD FFSEEQAPTL  300
HWYCPDQWT*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
15786KKRRLSVHQVKALEKNFEVENKLEPERKVK
2105113RRARWKTKQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G40060.14e-72HD-ZIP family protein