PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0024s0568.1.p
Organism
Kalanchoe fedtschenkoi
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family NF-YB
Protein Properties Length: 138aa    MW: 15752.9 Da    PI: 8.0274
Description NF-YB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0024s0568.1.pgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NF-YB166.92.5e-5225120297
                NF-YB   2 reqdrflPianvsrimkkvlPanakiskdaketvqecvsefisfvtseasdkcqrekrktingddllwalatlGfedyveplkvylkkyr 91 
                          +eq+r+lPianv+rimk++lP nakisk+aket+qecv+efisfvt+easdkc++e+rkt+ngdd++walatlGf++yv p++ yl+kyr
  Kaladp0024s0568.1.p  25 KEQERLLPIANVGRIMKEILPPNAKISKEAKETLQECVTEFISFVTGEASDKCKKERRKTLNGDDICWALATLGFDNYVLPMRRYLSKYR 114
                          89**************************************************************************************** PP

                NF-YB  92 elegek 97 
                          e+egek
  Kaladp0024s0568.1.p 115 EMEGEK 120
                          ***996 PP
Sequence ? help Back to Top
Protein Sequence    Length: 138 aa     Download sequence    
MVDNGEPSNT SKNPRREEAV EYTIKEQERL LPIANVGRIM KEILPPNAKI SKEAKETLQE  60
CVTEFISFVT GEASDKCKKE RRKTLNGDDI CWALATLGFD NYVLPMRRYL SKYREMEGEK  120
LSSYNLGNSS HFQDRKS*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G47810.19e-57NF-YB family protein