PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0024s0682.1.p
Organism
Kalanchoe fedtschenkoi
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family MYB
Protein Properties Length: 290aa    MW: 32756.1 Da    PI: 5.0223
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0024s0682.1.pgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding38.52.6e-121461148
                         TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
      Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                         rg+WT +Ed +l   +   G ++W+t+++  g+ R++k+c++rw +yl
  Kaladp0024s0682.1.p 14 RGPWTIDEDHKLMSFILGNGIHCWRTVPKLAGLLRCGKSCRLRWINYL 61
                         89******************************99************97 PP
2Myb_DNA-binding51.13.1e-1667110146
                          TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS
      Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 
                          rg +T+ E+++++++++ lG++ W++Ia+++  gRt++++k++w++
  Kaladp0024s0682.1.p  67 RGGFTEAEEDQIIELHAALGNR-WSKIASHFD-GRTDNEIKNHWNT 110
                          788*******************.*********.***********97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 290 aa     Download sequence    
MGRKPCCDKV GLKRGPWTID EDHKLMSFIL GNGIHCWRTV PKLAGLLRCG KSCRLRWINY  60
LRPDLKRGGF TEAEEDQIIE LHAALGNRWS KIASHFDGRT DNEIKNHWNT RIKKRLKEMG  120
VDLASHKSAA KPKQTGNEQP KDQMDADSDS TKEQPAQTAI REETPKVTNA DTQHEGSEDV  180
VVDNNKLSQF EHPGNDDDLL SDYDIFNGSL EVLEHWLNED SLELDGRSSS TSFSLNAPTS  240
ETSTGLHEAQ HSDSVIRDDN DPAYLHQWFD EMDSFFGFSS SLDITNHYE*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G14340.13e-83MYB family protein