PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Kaladp0024s0730.1.p

Organism

Kalanchoe fedtschenkoi

Taxonomic ID

63787

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe

Family

TCP

Protein Properties

Length: 160aa MW: 17128.1 Da PI: 9.79

Description

TCP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Kaladp0024s0730.1.p	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCP	109.4	5.3e-34	10	154	2	129
TCP 2 agkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgt................ssssasecea 75 g kdrh k+ T++g+RdRRvRls+++a++f+dLqd+LG d++sk++eWL+++a +i el+++ +++s+s++ Kaladp0024s0730.1.p 10 SGDKDRHNKVLTSKGLRDRRVRLSVSTAIQFYDLQDRLGNDQPSKAVEWLIKAAADSIAELPSLtgpfpetarqlcdaklGFESSSAAAV 99 578*************************************************************99999999999999884444433423 PP TCP 76 esssssasnsssgkaaksaakskksqksaasalnlak.esrakarararertrek 129 +++ +++++++ + + s+ s+ s++s+ s l+l + + r ++r ar r+ e+ Kaladp0024s0730.1.p 100 AAEADASHTQQKMNVCMSKSASSTSETSKGSGLSLTRtDARVNQRVGARARSGES 154 3333333334445666666666777777777777777666655555555554443 PP

Sequence ? help Back to Top
Protein Sequence Length: 160 aa Download sequence
MPIFRVSRAS GDKDRHNKVL TSKGLRDRRV RLSVSTAIQF YDLQDRLGND QPSKAVEWLI 60 KAAADSIAEL PSLTGPFPET ARQLCDAKLG FESSSAAAVA AEADASHTQQ KMNVCMSKSA 120 SSTSETSKGS GLSLTRTDAR VNQRVGARAR SGESEREGE*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G18390.1	5e-38	TCP family protein