PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0024s0785.1.p
Organism
Kalanchoe fedtschenkoi
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family C3H
Protein Properties Length: 286aa    MW: 31608.3 Da    PI: 9.0807
Description C3H family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0024s0785.1.pgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-CCCH29.51.3e-093863127
                         --S---SGGGGTS--TTTTT-SS-SSS CS
              zf-CCCH  1 yktelCrffartGtCkyGdrCkFaHgp 27
                         ykt+lC +f++ G C+ G +C+FaHg+
  Kaladp0024s0785.1.p 38 YKTKLCANFMA-GRCNNGRNCSFAHGR 63
                         9**********.*************96 PP
2zf-CCCH17.29.1e-0699122225
                          -S---SGGGGTS--TTTTT-SS-S CS
              zf-CCCH   2 ktelCrffartGtCkyGdrCkFaH 25 
                          k+ +C+ f+ +  C+yG++C F H
  Kaladp0024s0785.1.p  99 KMQPCKIFQSGKVCPYGEKCIFQH 122
                          8899******99**********99 PP
3zf-CCCH37.83.2e-12176202127
                          --S---SGGGGTS--TTTTT-SS-SSS CS
              zf-CCCH   1 yktelCrffartGtCkyGdrCkFaHgp 27 
                          +kt+ C  +  tG C++Gd+C+FaHg+
  Kaladp0024s0785.1.p 176 WKTKTCTKYETTGRCPFGDTCHFAHGQ 202
                          8************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 286 aa     Download sequence    
MSSRLNAAAD SDAIVITTGL PEDHRPVVVN QSKSNMFYKT KLCANFMAGR CNNGRNCSFA  60
HGREDMRFPP PNWRQLVAQG GDHAHVSRTS GENKEQHKKM QPCKIFQSGK VCPYGEKCIF  120
QHEYPRNMRV DDSGKMIRKS EPNEYMAGAD KAMATAGARS EDAARDEDKY AKFNYWKTKT  180
CTKYETTGRC PFGDTCHFAH GQAELQAPGG HNQTRFSSLQ PPATSPVRAA PPPIDSSAAG  240
GSRDADDSSS HGYRIGPRVN WIAREKGLHK ISRVYGDWPD MPPPN*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G19360.11e-39C3H family protein