PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0024s0815.1.p
Organism
Kalanchoe fedtschenkoi
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family LBD
Protein Properties Length: 214aa    MW: 23090.6 Da    PI: 7.3573
Description LBD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0024s0815.1.pgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF260143.94.9e-45111101100
               DUF260   1 aCaaCkvlrrkCakdCvlapyfpaeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleql 90 
                          +CaaCk+lrrkC+++Cv+apyfp +qp+kfanvhk+FGasnv+kll++l++++r+da++sl+yeA++r+rdPvyG+vgvi+ lq+ql+ql
  Kaladp0024s0815.1.p  11 PCAACKFLRRKCQPECVFAPYFPPDQPQKFANVHKVFGASNVTKLLNELHTSQRDDAVNSLAYEADMRLRDPVYGCVGVISLLQHQLRQL 100
                          7***************************************************************************************** PP

               DUF260  91 kaelallkee 100
                          + +la +k+e
  Kaladp0024s0815.1.p 101 QLDLACAKSE 110
                          *****99887 PP
Sequence ? help Back to Top
Protein Sequence    Length: 214 aa     Download sequence    
MASASALTTS PCAACKFLRR KCQPECVFAP YFPPDQPQKF ANVHKVFGAS NVTKLLNELH  60
TSQRDDAVNS LAYEADMRLR DPVYGCVGVI SLLQHQLRQL QLDLACAKSE LSKYKTAISG  120
AAAAQRSGVI QGGGAHGGHG QHHHYLGGHG QYHHQYQVVR SESSFDSGND NSNEDEFDAG  180
GFLDMLSQFQ QSAGRGGPGG EHDRRTTAAV DRF*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G65620.34e-65LBD family protein