PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0024s0844.1.p
Organism
Kalanchoe fedtschenkoi
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family M-type_MADS
Protein Properties Length: 250aa    MW: 27986.4 Da    PI: 9.7529
Description M-type_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0024s0844.1.pgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF49.84.3e-161050242
                         ---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-T CS
               SRF-TF  2 rienksnrqvtfskRrngilKKAeELSvLCdaevaviifss 42
                         +i n+s r+ t+ kR+ g++KK +ELS+LC+++ + +i+s+
  Kaladp0024s0844.1.p 10 FIANDSARKATYKKRKRGLMKKVNELSTLCGIDSCAVIYSP 50
                         899************************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 250 aa     Download sequence    
MTRKKVKLAF IANDSARKAT YKKRKRGLMK KVNELSTLCG IDSCAVIYSP YEAQPEVWPA  60
NPMSILGQFK KMPEMEQSKK MVNQESFLRQ RIAKAKDQLR RQLKENREKE MTELMFQCLI  120
GKEVHSLGMV DLNDLGWVID QYLKDVWNRI EAIKKDPAKA AGLPAGQVAC LDVSREEKPF  180
GAVQHHQLPQ LQWCSTFLTA GSAKQPQFGG AVGDPMTMMA GYGSGGHADP GGAWTSNPYS  240
YILDSKKWE*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1325RKKVKLAFIANDSARKATYKKRK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G48670.17e-66M-type_MADS family protein