PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0024s0856.1.p
Organism
Kalanchoe fedtschenkoi
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family C3H
Protein Properties Length: 241aa    MW: 26693.6 Da    PI: 6.6566
Description C3H family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0024s0856.1.pgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-CCCH36.11.1e-11626425
                         ---SGGGGTS--TTTTT-SS-S CS
              zf-CCCH  4 elCrffartGtCkyGdrCkFaH 25
                          lCr+++r G C+yG+rCkFaH
  Kaladp0024s0856.1.p  6 QLCRYYQR-GSCQYGARCKFAH 26
                         69******.************* PP
Sequence ? help Back to Top
Protein Sequence    Length: 241 aa     Download sequence    
MQPSKQLCRY YQRGSCQYGA RCKFAHEIEQ PSKANNSFGF GVQQNSGSVQ QQNNPFGFGP  60
FDNKWSRVSA NPGTGAAASP RKGDGQSPAA THSCTDPDSC KKQIAEDFEH ERPLWKLTCY  120
SHHKYAPCDI TGDVSYEELR MSAYDDAKSG MSLPAIVEKE RGLLNAKLVE FEALLRNPYK  180
GPSSSIATQS PFPQATPNAF MNNVASPSVT IYNTWGVYGF TENLVENEKE FFIWFGENWG  240
*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G75340.17e-65C3H family protein