PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Kaladp0024s0909.1.p

Organism

Kalanchoe fedtschenkoi

Taxonomic ID

63787

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe

Family

C2H2

Protein Properties

Length: 243aa MW: 26382.9 Da PI: 9.9578

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Kaladp0024s0909.1.p	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	17.9	8.4e-06	61	83	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C++C+k F r nL+ H r H Kaladp0024s0909.1.p 61 FVCEICSKGFQRDQNLQLHRRGH 83 89*******************88 PP
2	zf-C2H2	14.2	0.00013	137	159	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 +kC++C+k + +s+ k H + + Kaladp0024s0909.1.p 137 WKCEKCSKKYAVQSDWKAHAKIC 159 58*****************9987 PP

Sequence ? help Back to Top
Protein Sequence Length: 243 aa Download sequence
MAASSASGGD ASVSSSGDQP VAAAPPLKAA VKKKRNLPGM PDPDAEVIAL SPKTLMATNR 60 FVCEICSKGF QRDQNLQLHR RGHNLPWKLK QRSSKDVKKR VYVCPESTCV HHDPSRALGD 120 LTGIKKHFCR KHGEKTWKCE KCSKKYAVQS DWKAHAKICG TREYKCDCGT LFSRRDSFIT 180 HRAFCDALAE ESARATETQA PKRNGKGSHP RDDPKNQNAA AAPGSPQPAP TTDDVLSGTG 240 RC*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G50700.1	1e-115	C2H2 family protein