PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0026s0035.1.p
Organism
Kalanchoe fedtschenkoi
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family MYB
Protein Properties Length: 324aa    MW: 36220.5 Da    PI: 6.9488
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0026s0035.1.pgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding56.47e-181461148
                         TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
      Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                         +g+WT+eEd++l+ +++q+G g+W++ + + g+ R++k+c++rw +yl
  Kaladp0026s0035.1.p 14 KGPWTPEEDQKLLAYIEQHGHGSWRSLPLKAGLQRCGKSCRLRWTNYL 61
                         79********************************************97 PP
2Myb_DNA-binding53.26.7e-1767112148
                          TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
      Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 
                          rg+++ +E++ +++++++lG++ W++Ia +++ +Rt++++k++w+++l
  Kaladp0026s0035.1.p  67 RGKFSLQEEQTIIQLHALLGNR-WSAIATHLP-KRTDNEIKNYWNTHL 112
                          89********************.*********.************996 PP
Sequence ? help Back to Top
Protein Sequence    Length: 324 aa     Download sequence    
MGRSPCCDKV GLKKGPWTPE EDQKLLAYIE QHGHGSWRSL PLKAGLQRCG KSCRLRWTNY  60
LRPDIKRGKF SLQEEQTIIQ LHALLGNRWS AIATHLPKRT DNEIKNYWNT HLKKRLMKMG  120
IDPVTHKPKS DALVSNNSSC SSNLIDGHSS KSAANLSHMA QWESARLEAE ARLVRESRLR  180
SNPFQTPHHQ QLLLPETNPN HEMTGGLLFG GPADLESPSS TTLSFPGPVV SVSESRCSEY  240
LLESSCGEVK ETWTPESLRE DHEDHHAFNN NVIHNNNSAE AGFTELLLSN TAGGCQEDED  300
NKNYWNTILD LVNTSPAHDS PIF*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G15310.11e-112MYB family protein