PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0026s0063.1.p
Organism
Kalanchoe fedtschenkoi
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family MIKC_MADS
Protein Properties Length: 242aa    MW: 27817 Da    PI: 8.6789
Description MIKC_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0026s0063.1.pgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF99.81e-31959151
                         S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS
               SRF-TF  1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51
                         krienk+nrqvtf+kRrng+lKKA+ELSvLCdaeva+iifs++gklye++s
  Kaladp0026s0063.1.p  9 KRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCS 59
                         79***********************************************96 PP
2K-box83.25.9e-28821739100
                K-box   9 leeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkkl 98 
                            +++ es+++e+ kLk + e Lq +qR+llGedL++Ls keL+qLe+qLe+ lk iRs++++ +l+++ elq+ke +l e ++ L++kl
  Kaladp0026s0063.1.p  82 RPNKELESSYREYLKLKGKFEALQLTQRNLLGEDLGPLSTKELEQLEHQLESTLKLIRSTRTQCMLDKLAELQNKESALLESKRILEMKL 171
                          4678899**********************************************************************************9 PP

                K-box  99 ee 100
                          ee
  Kaladp0026s0063.1.p 172 EE 173
                          86 PP
Sequence ? help Back to Top
Protein Sequence    Length: 242 aa     Download sequence    
MGRGRVELKR IENKINRQVT FAKRRNGLLK KAYELSVLCD AEVALIIFSN RGKLYEFCST  60
NNMMKTLERY QKCSYGAVEV NRPNKELESS YREYLKLKGK FEALQLTQRN LLGEDLGPLS  120
TKELEQLEHQ LESTLKLIRS TRTQCMLDKL AELQNKESAL LESKRILEMK LEEMVPKNSF  180
RLSWEAGEQS MPYHQAQSHA LYQQLDCNPT LQIGYDQVAA DQMNATTSTH QVSGFIPGWM  240
L*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G02310.11e-117MIKC_MADS family protein