PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0026s0083.1.p
Organism
Kalanchoe fedtschenkoi
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family LBD
Protein Properties Length: 218aa    MW: 23804.2 Da    PI: 8.4972
Description LBD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0026s0083.1.pgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF26095.94.4e-304107199
               DUF260   1 aCaaCkvlrrkCakdCvlapyf.....paeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqq 85 
                          +C++C+vlr++C+++C++ p++     p++q++++ +++k++G++ +l+l++a+p++ r+++++sl+yeA  r+ +P+yG vg+++++++
  Kaladp0026s0083.1.p   4 SCNGCRVLRKGCTDSCTIKPCLqwiktPEAQANATLFLAKFYGRAGLLNLIDAAPPHLRPAVFRSLLYEASGRILNPIYGPVGLLWSGSW 93 
                          6***************************************************************************************** PP

               DUF260  86 qleqlkaelallke 99 
                          ql+q++++ +l ++
  Kaladp0026s0083.1.p  94 QLCQAAVDCVLNGS 107
                          ******99887765 PP
Sequence ? help Back to Top
Protein Sequence    Length: 218 aa     Download sequence    
MRMSCNGCRV LRKGCTDSCT IKPCLQWIKT PEAQANATLF LAKFYGRAGL LNLIDAAPPH  60
LRPAVFRSLL YEASGRILNP IYGPVGLLWS GSWQLCQAAV DCVLNGSPIT PINSEAAETP  120
QGPPLKTCDI RHVSKDLHKV KSRCRFKRSD SKQAVVNKID RRPEPEKNRS ASHDSTVSHP  180
AQPVWHFEEP SRDSESVLSG ETDAAVAGFD LELSLGI*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G02550.12e-82LBD family protein