PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0026s0109.1.p
Organism
Kalanchoe fedtschenkoi
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family MIKC_MADS
Protein Properties Length: 333aa    MW: 37231 Da    PI: 6.8509
Description MIKC_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0026s0109.1.pgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF83.91e-26958150
                         S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE CS
               SRF-TF  1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeys 50
                         krien +nrqvtfskRrng++KKA+ELS+LCd+++a+i+fs++++l  +s
  Kaladp0026s0109.1.p  9 KRIENITNRQVTFSKRRNGLIKKAYELSILCDVDIALIMFSPSQRLSHFS 58
                         79********************************************9997 PP
2K-box15.19.6e-07117177969
                K-box   9 leeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskK 69 
                            +++ e+lqqel+ L+ + +  q+++R +  + L+  s+ eL+  e++L + +++i  +K
  Kaladp0026s0109.1.p 117 SVNSNVEELQQELSSLQHQFQIAQEKLRIYEPNPLDFSSMAELEACEKNLMDIMSNISVRK 177
                          457789*********************************************9999999888 PP
Sequence ? help Back to Top
Protein Sequence    Length: 333 aa     Download sequence    
MGRVKLQIKR IENITNRQVT FSKRRNGLIK KAYELSILCD VDIALIMFSP SQRLSHFSGK  60
RRIEDVLTRY INLPDHDRGG DRIASKKCRI VLNNEYLITT LQTLRAVALQ LANQGRSVNS  120
NVEELQQELS SLQHQFQIAQ EKLRIYEPNP LDFSSMAELE ACEKNLMDIM SNISVRKLYL  180
DEQNGVPVSP TSFENKVISW MPGNGSNPNL IFVGSDPSTG SISIRNHSSF TIYDPMLQGS  240
GITTDHESMN GCHITNSTYE QIPPWHQSYT SAELLSVFMP PTSFSQIKEM GGPSMQSMMT  300
SQQGEATSSC QHQQAPSAGE SLSATYDHHQ AQ*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G22130.16e-80MIKC_MADS family protein