PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Kaladp0027s0036.2.p

Organism

Kalanchoe fedtschenkoi

Taxonomic ID

63787

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe

Family

FAR1

Protein Properties

Length: 665aa MW: 76574.3 Da PI: 7.0969

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Kaladp0027s0036.2.p	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	71.9	1.5e-22	56	140	1	90
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90 +fYn YA++ GF +r+ +s +++++e ++++f Cs+ g+++++ + ++r+etrtgC a++ +++ + ++w+++++el+HnH+++ Kaladp0027s0036.2.p 56 DFYNLYARQQGFGIRVGNSWFRSKQKERYRAKFSCSNAGFKRKSVAS-----HPRPETRTGCPAMVIIRLVDCKRWRIIEVELQHNHTFS 140 6***************************************99887.....9********************************986 PP

Sequence ? help Back to Top
Protein Sequence Length: 665 aa Download sequence
MEVVSLNREP VFEEASHQGT DEDLELQDDT PGLALNRNPP QPTVGLEFDS FDEAYDFYNL 60 YARQQGFGIR VGNSWFRSKQ KERYRAKFSC SNAGFKRKSV ASHPRPETRT GCPAMVIIRL 120 VDCKRWRIIE VELQHNHTFS SEMKRVYKSH KKMVLAAKEE NKQDPVLETR IIKLYRTPTM 180 DSNFQLCANV GSGENRNHLE HSNNLELKDG DASTVYNFFC RLKLTDPNFF YLMDHDNEGR 240 LKNIFWADSR SRLTYKSFND TIMIETTCLA SKYELQLISF VGVNNHGYSV LLGCSLVASV 300 SVENFIWVLR TWLACMLQQP PQVVITDQSK LLQSAVAEVL PGARHCYSLW HIIQRLPEKL 360 GGLSGYEGIK NQFVNTVFSA LKFSEFETSW ELMIEQHGLG DNKWLQALHE DCQNWVPVYL 420 KNVFFAGLMP TQESDALNGF FDGYVHKHTT IKEFLDKYEL ALHRKLLKDA IADQESRTLA 480 SGLVTKSSFK LQLSKIYSKE IFKKFQAEVE GMYSCFNTKQ LVTNGPVITY LIKERLTGKG 540 HERIVKQYEV FYEATTMDVR CICCLFNFKG YLCRHALSVL NYIGIEEIPS QYILPRWCTD 600 FKCRLGQGHP SNDVDTNDQL QQYHHLIRHG IPFVEYGAQS EQDYKAVLKE LESIVDKVIS 660 LHDN*

Sequence ? help Back to Top

Protein Sequence Length: 665 aa Download sequence

MEVVSLNREP VFEEASHQGT DEDLELQDDT PGLALNRNPP QPTVGLEFDS FDEAYDFYNL  60
YARQQGFGIR VGNSWFRSKQ KERYRAKFSC SNAGFKRKSV ASHPRPETRT GCPAMVIIRL  120
VDCKRWRIIE VELQHNHTFS SEMKRVYKSH KKMVLAAKEE NKQDPVLETR IIKLYRTPTM  180
DSNFQLCANV GSGENRNHLE HSNNLELKDG DASTVYNFFC RLKLTDPNFF YLMDHDNEGR  240
LKNIFWADSR SRLTYKSFND TIMIETTCLA SKYELQLISF VGVNNHGYSV LLGCSLVASV  300
SVENFIWVLR TWLACMLQQP PQVVITDQSK LLQSAVAEVL PGARHCYSLW HIIQRLPEKL  360
GGLSGYEGIK NQFVNTVFSA LKFSEFETSW ELMIEQHGLG DNKWLQALHE DCQNWVPVYL  420
KNVFFAGLMP TQESDALNGF FDGYVHKHTT IKEFLDKYEL ALHRKLLKDA IADQESRTLA  480
SGLVTKSSFK LQLSKIYSKE IFKKFQAEVE GMYSCFNTKQ LVTNGPVITY LIKERLTGKG  540
HERIVKQYEV FYEATTMDVR CICCLFNFKG YLCRHALSVL NYIGIEEIPS QYILPRWCTD  600
FKCRLGQGHP SNDVDTNDQL QQYHHLIRHG IPFVEYGAQS EQDYKAVLKE LESIVDKVIS  660
LHDN*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G52520.1	0.0	FAR1 family protein