PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0028s0046.1.p
Organism
Kalanchoe fedtschenkoi
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family C2H2
Protein Properties Length: 183aa    MW: 19661.8 Da    PI: 10.0944
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0028s0046.1.pgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H211.90.000713961123
                         EEETTTTEEESSHHHHHHHHHHT CS
              zf-C2H2  1 ykCpdCgksFsrksnLkrHirtH 23
                         ++C+ Cg+ Fs+   L  H  +H
  Kaladp0028s0046.1.p 39 FECKTCGRAFSSFQALGGHSASH 61
                         89*********998887777764 PP
2zf-C2H211.80.0007490112123
                          EEETTTTEEESSHHHHHHHHHHT CS
              zf-C2H2   1 ykCpdCgksFsrksnLkrHirtH 23 
                          ++C++Cg+ F     L  H+r+H
  Kaladp0028s0046.1.p  90 HECSICGMKFGLGQALGGHMRRH 112
                          78********************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 183 aa     Download sequence    
MMKRGREDES STEADAAECL VRLSCASRNS AGSSGRVMFE CKTCGRAFSS FQALGGHSAS  60
HHKKPKPSPG EAATAMASEA VRVKAEPTVH ECSICGMKFG LGQALGGHMR RHRIELKGGG  120
VVGDRPRGIV SDQDAKLLVP VLRRSLSKNK RVMCMDLNLT PLENDLELLF GKMAPKVDRR  180
LV*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G37430.13e-35C2H2 family protein