PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0028s0073.1.p
Organism
Kalanchoe fedtschenkoi
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family bHLH
Protein Properties Length: 167aa    MW: 19053.3 Da    PI: 10.0992
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0028s0073.1.pgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH24.45.1e-08961351054
                          HHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
                  HLH  10 rrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                          r+RR+ri +++  L++l+P       +K++ a++L +A++Y+  L
  Kaladp0028s0073.1.p  96 RQRRERISERMRILQRLVPGG-----TKMDTASMLDEAIHYVTFL 135
                          9******************87.....8**************9877 PP
Sequence ? help Back to Top
Protein Sequence    Length: 167 aa     Download sequence    
MDASMELLIM MQGDARLHRH IQNSAFDHHI PAPTKKFQNP IPEMPEYDKY NRMSAMREMI  60
FGIAALQPVE IDPEAVKPPR RKNVRISKDP QSVTARQRRE RISERMRILQ RLVPGGTKMD  120
TASMLDEAIH YVTFLKKQVQ RLETAVAGRV PPEMLEGQMM MGLGCV*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
196101RQRRER
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G50330.13e-42bHLH family protein